| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3032 |
|---|
| Symbol | |
|---|
| ID | 7110136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 3383483 |
|---|
| End bp | 3385126 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643481275 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002378302 |
|---|
| Protein GI | 218439973 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGG AAATTCCCAG TGGTTCAGTT CCTTTAGATT CTCCCTTTTA TATCCCTTGG
ATGTCTATTG AGGAACAGAT TAAGCAAGAA ATTAACAAAC CGGGTAGCTT AATTCGGATT
AAATCTCCGA AAAGAACCGG TAAAACTTCA TTATTAGTAA GAATATTGGA CGCAGTGAAG
AGTCAAGGCT ACCAGAGTGT TAGTCTTAAT TTAGAGCAAG TTGATTCAAC TATTTTGGGA
GATCTCAATC GGTTGTTACG CTGGTTATGT ATCAGTATAA CTCGACAGTT AGGACTGAAA
AATCTAATCA ATGATTATTG GGATGAAGAT ATTGGGAGTA AAGTTAGCTG TACGATTTAT
TTTGAAGATT ACTTACTGAA AAATATTAAT GTACCTCTGA TTCTAGCGTT AGATGAAGTT
AATTACATTT TTAATCATCC TAATGTAGCT AAAGATTTTT TTCCTTTATT ACGGTCTTGG
TATGAAGAGG CAAAAAGAAA TGTAATTTGG CGAAAACTAC GTTTTATCAT AGTTTACTCG
ACAGAAATCT ATATTCCTTT ACAGTTGAAT CAATCTCCTT TTAATATAGG GTTGCCGATT
AAATTACCAG AGTTTGATAT CTCTCAAATT CAAGAATTAG CTAAACGACA TAATCTTAAT
TGGACAACGG AAAAACAAGC CATTCAACTG ATGGAAATGA TTGGGGGACA TCCCTACTTA
GTTCGACTCG CTTTGTATTA TCTTGCTCAG GGAGAGTTGA CATTGACTCA ACTGATCCAA
AATGCTTTAA CATCCGGAGG AATTTATAGC GATCATTTGC GGGAGCATTT AATCACTTTG
CAAAAAGATC CCAGTTTAGG TGTGGCGTTC AAAAAAATTA TTGCCCAAGA AAATTTTGTT
TTAGAGCCAA CATTAGCCTA TAAATTAGAT AGTATGGGTC TAGTCAAGTT TGTCGATCAA
CAATGGCAAC CTTTATGTAA TTTATATCGC TTTTATTTTC TTCAACAAAA TTTAGAACAG
GAGGATATTT TCGAGCCTCG TCTGATAAAA TTAACTCAGG AAAATAAACG TCTAAGAAAG
TTAGTTTATC TCGATGAATT GACGGGAATT TATAATCGGC GTTATTTTGA TCATTATTTG
GAACGAGAAT GGAGACGGAT GACGAGAGAA AAAGCTCCAT TATCGTTAAT GTTGTTAGAT
ATTGATTATT TTAAGAATTA CAATGATACC TATGGACATC AACTAGGAGA TGCTTGTTTA
AAAAAAGTTG CTCAAGCCAT TCAAAAATCT CTAAAACGCT CAACAGATAT TGTTGCTCGC
TATGGAGGGG AAGAATTTGC AATTATCATA TCTCAATGTG ATAATAAAGG CGCTCTTTTT
TTGGCAGAAA TAATTCGAGA ACAGATTAAA TCTCTTGCCA TTAATCATAA AAATTCTCAG
GTTAATTTAA AAATTGTTAC GGCTAGTATA GGGGTTGCTA CTATTATCCC CGCTCTTGAA
ACGCAACCGA AAATGCTCAT TCAAATGGCT GATGAGGCAT TATATCAGTC TAAACATGAG
GGACGAAATA GAGTGACCTT TAGAAATAAT CAACCCCTTA TACTTTTTGA AAAATGCACA
AATTCTCATG AAGAAAGGCT ATAG
|
|---|
| Protein sequence | MLLEIPSGSV PLDSPFYIPW MSIEEQIKQE INKPGSLIRI KSPKRTGKTS LLVRILDAVK
SQGYQSVSLN LEQVDSTILG DLNRLLRWLC ISITRQLGLK NLINDYWDED IGSKVSCTIY
FEDYLLKNIN VPLILALDEV NYIFNHPNVA KDFFPLLRSW YEEAKRNVIW RKLRFIIVYS
TEIYIPLQLN QSPFNIGLPI KLPEFDISQI QELAKRHNLN WTTEKQAIQL MEMIGGHPYL
VRLALYYLAQ GELTLTQLIQ NALTSGGIYS DHLREHLITL QKDPSLGVAF KKIIAQENFV
LEPTLAYKLD SMGLVKFVDQ QWQPLCNLYR FYFLQQNLEQ EDIFEPRLIK LTQENKRLRK
LVYLDELTGI YNRRYFDHYL EREWRRMTRE KAPLSLMLLD IDYFKNYNDT YGHQLGDACL
KKVAQAIQKS LKRSTDIVAR YGGEEFAIII SQCDNKGALF LAEIIREQIK SLAINHKNSQ
VNLKIVTASI GVATIIPALE TQPKMLIQMA DEALYQSKHE GRNRVTFRNN QPLILFEKCT
NSHEERL
|
|---|
| |