Gene PCC7424_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3006 
Symbol 
ID7110109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3357699 
End bp3359219 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content42% 
IMG OID643481248 
Productcircadian clock protein KaiC 
Protein accessionYP_002378276 
Protein GI218439947 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID[TIGR02655] circadian clock protein KaiC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG ACAACGAACA GGAGTACATA GAAAAACTAG AAACCGGAAT CCCAGGATTT 
GACTTCCTCT CAGAAGGAGG ACTTCCTAAA GGTCGAGCAA CTTTAGTGGC CGGAACAGCA
GGTAGCGCTA AAACAGTCTT TGCTTGTCAA TTTCTCGCTG AAGGAATTAA ACGGGGGGAA
AATGGTGTTT TTGTAACTTT TGAAGAACCC CCTAAAGCAC TACGGAAAAA TATGCGGGGG
TTTGGCTGGA ATATTAGTCA ATGGGAAGAA GAACGAAAAT GGGCGTTTGT GGATGCTTCC
CCTCAACCCG GAGACAAACC GATGGTTACG GGAGAATATG ACCTCGGTGC TTTAATTGCT
CGGATTGAGT TTGCTATCCG AAAATATAAG GCTCAACGGG TTTCGATGGA TTCTTTAGGG
GCGATTTTCA GCCATTTTAT GGATATGGCT CAAGTTCGTA GTGATTTATT TAGGCTGGCT
TCTGCTTTAC GAGAATTAGA AGTTACGGCT ATTATGACCG CAGAACGAAC TCAGGAGTAT
GGGGAAATTA GTCGCTACGG GGTTGAGGAA TTTGTCGCGG ATAATGTGGT GATTTTGCGG
AATGCTTTAG CGGATGAAAA GCGTCGTCGT ACCATTGAAA TTCTGAAATA TCGAGGCACT
GACCATCAAA AGGGTGAATT TCCCTTTACG GTGATTAGCA ATAAGGGCTT GGTGATTATT
CCCCTTTCTG CGATCGAATT AGAACAAAAA TCCTCGAATA TTCGTATTAC TTCCGGCAGT
GAAGAATTAG ACCGGATGTG TGGGGGTGGG TTTTTTCGAG ATTCTATTAT TTTGGTTTCC
GGCGCAACAG GAACGGGTAA AACGTTGATG GTGACAGAGT TTATGGCCGG AGGAGTGGCT
AATGGGGAAC GATGTTTAGT TTTTGCCTTT GAAGAAAGTC GAGAACAATT GTTTAGAAAT
GCGACGGGTT GGGGTGTGGA TTTTAATCGC ATGGAACAAG AAGGTAAGCT TAAAGTCGTT
TGTCGTTATC CTGAAACCAC AGGATTAGAA AATCATTTGA TTTCGATGAA GGAAATGATC
GAAGAGTTTA AACCTAACCG AGTAGCCGTT GATAGTTTAT CCGCCTTAGA AAGAGTGTCT
TCCCTTAAAG GGTTTCGAGA ATTTATTATC GGGTTAACTT CCTTTATTAA ACAAAAGGAA
ATAGGGGGTT TATTCACTTC AACGACTCCC AATCTTTTAG GAGGAGCTTC CATTACAGAA
GGCCATATTT CCACGATTAC AGATTCAATT ATTTTATTAC GGTATGTAGA AATGTATGGA
GAAATGCGCC GAGGAATTAC GGTTTTAAAA ATGCGCGGGT CAATGCACGA TAAAGATATC
CGAGAGTTTT CTATTGATAA TAAAGGGATG CACATTGGTA AACCTTTCCG CAATGTAACG
GGTATATTGG CCGGAACCCC TACCTATACA GCCCAAGCAG AAGTCGAGCG TCTTAGCGGT
TTGTTTGAAG AACGGTCTTA G
 
Protein sequence
MNQDNEQEYI EKLETGIPGF DFLSEGGLPK GRATLVAGTA GSAKTVFACQ FLAEGIKRGE 
NGVFVTFEEP PKALRKNMRG FGWNISQWEE ERKWAFVDAS PQPGDKPMVT GEYDLGALIA
RIEFAIRKYK AQRVSMDSLG AIFSHFMDMA QVRSDLFRLA SALRELEVTA IMTAERTQEY
GEISRYGVEE FVADNVVILR NALADEKRRR TIEILKYRGT DHQKGEFPFT VISNKGLVII
PLSAIELEQK SSNIRITSGS EELDRMCGGG FFRDSIILVS GATGTGKTLM VTEFMAGGVA
NGERCLVFAF EESREQLFRN ATGWGVDFNR MEQEGKLKVV CRYPETTGLE NHLISMKEMI
EEFKPNRVAV DSLSALERVS SLKGFREFII GLTSFIKQKE IGGLFTSTTP NLLGGASITE
GHISTITDSI ILLRYVEMYG EMRRGITVLK MRGSMHDKDI REFSIDNKGM HIGKPFRNVT
GILAGTPTYT AQAEVERLSG LFEERS