Gene PCC7424_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2942 
Symbol 
ID7108487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3277404 
End bp3279302 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content42% 
IMG OID643481186 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002378214 
Protein GI218439885 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACTC GTCTATTCCT CATATTGATA ACTTTATTCT TAAATGTCCC TCCTAATCCC 
ATTCTTGCTC AAAACATCGA TCAACTGTTT GAACAAGGCA ACGCCGCCCA AAATGAGGGA
AACTTTACAG AAGCAGAACG GATTTTTCGC CAAGTCATAA AAATTAATCC TAACAATGCA
GATGCTTACA GATATCTGGG CATTGCCCTA AGAAATCAAG GGAAGTTGGA AGAGGCGATC
GCAGCCTACA ATACAGCCAT CGAAATCAAT CCTAATTATG CAGAAGTCTA CAACAATCTG
GGGGTTGCCC TATACTATCA AGGGAAGTTA GAAGAGGCGA TCGCAGCTTA CAATACAGCC
ATCGAAATCA ATCCTAATTA TGCAGAAGTC TACAGCAATC TGGGCTTTGC TCTATCTAAT
CAAGGGAAGT TAGAAGAGGC GATCGCAGCC TACAATAAAG CCATCGAAAT CAATCCTAAT
TATGCTTTTG CTTACATAGG TCTGGGGATT GCCCTATACA ATCAAGGGAA GTTAGAAGAG
GCGATCGCAG CTTACAATAA AGCCATCGAA ATCAATCCTA ATTATGCAGA AGTCTACAGC
AATCTGGGCT TTGCCCTATA CAATCAAGGG AAGTTAGAAG AGGCGATCGC AGCTTACAAT
ACAGCCATCG AAATCAACCC TAATGATGCT TTTGCTTACA ACAATCTGGG GATTGCCCTA
TCTAATCAAG GGAAGTTAGA AGAGGCGATC GCAGCCTACA ATACAGCCAT CGAAATCAAC
CCTAATGATG CTTTTGCTTA TAACAATCTG GGGGTTGCCC TATACAATCA AGGGAAGTTA
GAAGAGGCGA TCGCAGCCTA CAATACAGCC ATCGAAATCA ACCCTAATGA TGCTTTTGCT
TACATAGGTC TGGGGATTGC CCTACATGAT CAAGGGAAGT TAGAAGAGGC GATCGCAGCC
TACAACAAAA CCTTAAGTTT AGCAGATAAG AAAGCAGATC GCGCTAGCGT TCACACTTTA
GCTCACACTA CTTTAGGTTA TGCTCTTCAG CAACAAGGGA AATTAGAAGA AGCTATTGCA
GAATATGAAA AAGCCCTTAA AATCGATCCT AACAACACAA CTGCTCAAAA CAACCTGAAA
GAAGCACTAA TTCAATTAAC CATAAAACTC TATCCTAGCC TAACAGTAGT AGATGAACAA
AAACACATCC CCTGGGACGA ACCCTTAATC AAAGAATTAC GAGCAACAGT GCGAATTATT
GCCCTAGTTT CCCCAGAGGG TTATTCTATC GCTTCAGGTT GGGTAGTCAA GCGCTCTGGT
GATACAGTTT GGATTGTGAC TAACCGCCAT GTTATCAGCG ATCGGAAAAC TCAGCGCCTC
GCTACTGACA TAAAAGTTCA GTTTTTTAGT GAATTGGAAG ACCCCCAGCG CCCTCGCTAC
ACAGCTACCA TAGAAAAATT CACTGATCAG GGTGAGTCAT TAGATTTAGC TGTCTTGAAA
GTAAGCGGCA TTCCCTCAGA CATTCAACCC TTAACCCCTT ACACCGGCAG ACTTAATCGT
AATACTCCCG TACAAGTGAT CGGACATCCT AATGCCCTTG AAATACCTTG GAATACTTCC
AAAGGAGATG TTATGAACTA CAATCCTAAC AATTCCACTT TTCCGATCGA TGCTTATGTC
AGTCAAGGTA ATTCAGGGGG GCCAGTGATT AACGAACAAA AGCAGATTAT TGGCATGATG
GTAACGATTA GAAGAAGAGA AGAAGTTGCT ATTGCTTATA ATCCCAATGA ACCAGCCCCC
AATTTAGATG ATATTGTTCC TGCTACGGGT GATGCAGGTA TAGCCTATCG TATTGATATT
GTTATGGAAA AATTGCAGAG TTGGGGCATT TTACCTTAA
 
Protein sequence
MLTRLFLILI TLFLNVPPNP ILAQNIDQLF EQGNAAQNEG NFTEAERIFR QVIKINPNNA 
DAYRYLGIAL RNQGKLEEAI AAYNTAIEIN PNYAEVYNNL GVALYYQGKL EEAIAAYNTA
IEINPNYAEV YSNLGFALSN QGKLEEAIAA YNKAIEINPN YAFAYIGLGI ALYNQGKLEE
AIAAYNKAIE INPNYAEVYS NLGFALYNQG KLEEAIAAYN TAIEINPNDA FAYNNLGIAL
SNQGKLEEAI AAYNTAIEIN PNDAFAYNNL GVALYNQGKL EEAIAAYNTA IEINPNDAFA
YIGLGIALHD QGKLEEAIAA YNKTLSLADK KADRASVHTL AHTTLGYALQ QQGKLEEAIA
EYEKALKIDP NNTTAQNNLK EALIQLTIKL YPSLTVVDEQ KHIPWDEPLI KELRATVRII
ALVSPEGYSI ASGWVVKRSG DTVWIVTNRH VISDRKTQRL ATDIKVQFFS ELEDPQRPRY
TATIEKFTDQ GESLDLAVLK VSGIPSDIQP LTPYTGRLNR NTPVQVIGHP NALEIPWNTS
KGDVMNYNPN NSTFPIDAYV SQGNSGGPVI NEQKQIIGMM VTIRRREEVA IAYNPNEPAP
NLDDIVPATG DAGIAYRIDI VMEKLQSWGI LP