| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2942 |
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| Symbol | |
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| ID | 7108487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3277404 |
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| End bp | 3279302 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643481186 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002378214 |
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| Protein GI | 218439885 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACTC GTCTATTCCT CATATTGATA ACTTTATTCT TAAATGTCCC TCCTAATCCC
ATTCTTGCTC AAAACATCGA TCAACTGTTT GAACAAGGCA ACGCCGCCCA AAATGAGGGA
AACTTTACAG AAGCAGAACG GATTTTTCGC CAAGTCATAA AAATTAATCC TAACAATGCA
GATGCTTACA GATATCTGGG CATTGCCCTA AGAAATCAAG GGAAGTTGGA AGAGGCGATC
GCAGCCTACA ATACAGCCAT CGAAATCAAT CCTAATTATG CAGAAGTCTA CAACAATCTG
GGGGTTGCCC TATACTATCA AGGGAAGTTA GAAGAGGCGA TCGCAGCTTA CAATACAGCC
ATCGAAATCA ATCCTAATTA TGCAGAAGTC TACAGCAATC TGGGCTTTGC TCTATCTAAT
CAAGGGAAGT TAGAAGAGGC GATCGCAGCC TACAATAAAG CCATCGAAAT CAATCCTAAT
TATGCTTTTG CTTACATAGG TCTGGGGATT GCCCTATACA ATCAAGGGAA GTTAGAAGAG
GCGATCGCAG CTTACAATAA AGCCATCGAA ATCAATCCTA ATTATGCAGA AGTCTACAGC
AATCTGGGCT TTGCCCTATA CAATCAAGGG AAGTTAGAAG AGGCGATCGC AGCTTACAAT
ACAGCCATCG AAATCAACCC TAATGATGCT TTTGCTTACA ACAATCTGGG GATTGCCCTA
TCTAATCAAG GGAAGTTAGA AGAGGCGATC GCAGCCTACA ATACAGCCAT CGAAATCAAC
CCTAATGATG CTTTTGCTTA TAACAATCTG GGGGTTGCCC TATACAATCA AGGGAAGTTA
GAAGAGGCGA TCGCAGCCTA CAATACAGCC ATCGAAATCA ACCCTAATGA TGCTTTTGCT
TACATAGGTC TGGGGATTGC CCTACATGAT CAAGGGAAGT TAGAAGAGGC GATCGCAGCC
TACAACAAAA CCTTAAGTTT AGCAGATAAG AAAGCAGATC GCGCTAGCGT TCACACTTTA
GCTCACACTA CTTTAGGTTA TGCTCTTCAG CAACAAGGGA AATTAGAAGA AGCTATTGCA
GAATATGAAA AAGCCCTTAA AATCGATCCT AACAACACAA CTGCTCAAAA CAACCTGAAA
GAAGCACTAA TTCAATTAAC CATAAAACTC TATCCTAGCC TAACAGTAGT AGATGAACAA
AAACACATCC CCTGGGACGA ACCCTTAATC AAAGAATTAC GAGCAACAGT GCGAATTATT
GCCCTAGTTT CCCCAGAGGG TTATTCTATC GCTTCAGGTT GGGTAGTCAA GCGCTCTGGT
GATACAGTTT GGATTGTGAC TAACCGCCAT GTTATCAGCG ATCGGAAAAC TCAGCGCCTC
GCTACTGACA TAAAAGTTCA GTTTTTTAGT GAATTGGAAG ACCCCCAGCG CCCTCGCTAC
ACAGCTACCA TAGAAAAATT CACTGATCAG GGTGAGTCAT TAGATTTAGC TGTCTTGAAA
GTAAGCGGCA TTCCCTCAGA CATTCAACCC TTAACCCCTT ACACCGGCAG ACTTAATCGT
AATACTCCCG TACAAGTGAT CGGACATCCT AATGCCCTTG AAATACCTTG GAATACTTCC
AAAGGAGATG TTATGAACTA CAATCCTAAC AATTCCACTT TTCCGATCGA TGCTTATGTC
AGTCAAGGTA ATTCAGGGGG GCCAGTGATT AACGAACAAA AGCAGATTAT TGGCATGATG
GTAACGATTA GAAGAAGAGA AGAAGTTGCT ATTGCTTATA ATCCCAATGA ACCAGCCCCC
AATTTAGATG ATATTGTTCC TGCTACGGGT GATGCAGGTA TAGCCTATCG TATTGATATT
GTTATGGAAA AATTGCAGAG TTGGGGCATT TTACCTTAA
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| Protein sequence | MLTRLFLILI TLFLNVPPNP ILAQNIDQLF EQGNAAQNEG NFTEAERIFR QVIKINPNNA
DAYRYLGIAL RNQGKLEEAI AAYNTAIEIN PNYAEVYNNL GVALYYQGKL EEAIAAYNTA
IEINPNYAEV YSNLGFALSN QGKLEEAIAA YNKAIEINPN YAFAYIGLGI ALYNQGKLEE
AIAAYNKAIE INPNYAEVYS NLGFALYNQG KLEEAIAAYN TAIEINPNDA FAYNNLGIAL
SNQGKLEEAI AAYNTAIEIN PNDAFAYNNL GVALYNQGKL EEAIAAYNTA IEINPNDAFA
YIGLGIALHD QGKLEEAIAA YNKTLSLADK KADRASVHTL AHTTLGYALQ QQGKLEEAIA
EYEKALKIDP NNTTAQNNLK EALIQLTIKL YPSLTVVDEQ KHIPWDEPLI KELRATVRII
ALVSPEGYSI ASGWVVKRSG DTVWIVTNRH VISDRKTQRL ATDIKVQFFS ELEDPQRPRY
TATIEKFTDQ GESLDLAVLK VSGIPSDIQP LTPYTGRLNR NTPVQVIGHP NALEIPWNTS
KGDVMNYNPN NSTFPIDAYV SQGNSGGPVI NEQKQIIGMM VTIRRREEVA IAYNPNEPAP
NLDDIVPATG DAGIAYRIDI VMEKLQSWGI LP
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