Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2917 |
Symbol | |
ID | 7108462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3246210 |
End bp | 3249602 |
Gene Length | 3393 bp |
Protein Length | 1130 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643481161 |
Product | trehalose synthase |
Protein accession | YP_002378189 |
Protein GI | 218439860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA AATTACAAGA AACCAGCATG AGGGATACAC TATTAAATTG GACAGCAACC CAAAAACAAA CTTCTATGTT AAAAGACGAT CCTTTATGGT TTAAAAATGC TATTATTTAT GAAGTGCCTG TTCGCGCCTT TGCTGACAGT AATGGTGATG GTATTGGTGA CTTTAAAGGA TTAACCCAAA AGTTAGATTA TCTACAAGAT TTAGGGGTGA GTGCAGTCTG GGTATTACCG TTTTTTCCTT CGCCCCTTAA AGATGATGGC TATGATATTA GCGATTATAA TAATGTTAAT CCCATTTATG GAACTTTAGA AGATTTTAAA GAATTTCTTA ATGCGGCACA TCAGCGAGGA ATTCGCGTCA TTATTGAATT AATTGTCAAT CATACCTCCG ACACTCATCC CTGGTTTCAA CGCGCCCGTC GTGCCCCTAA AGGCAGCGTA GAACGGGATT TTTATGTGTG GAGTGATACC CCCGATAAAT ATCGAGAAGC GCGGATTATT TTCCAAGATT TTGAATCGTC TAATTGGTCT TGGGACTCCG TCGCCAATGC TTATTATTGG CATCGATTTT ACTCCCATCA ACCCGATTTA AATTATGATA ATCCTGCCGT CCGGCAAGCG GTTTTTGAAG TGTTGGATTT TTGGTTAAGT ATGGGAGTAG ATGGGTTAAG ATTAGATGCA GTTCCCTATC TATATGAGCG AGATGGGACG AACTGCGAAA ACCTCCCAGA AACTCACCAA ATTTTAAAAG ATTTACGTCA ATATATCGAT CAAAAATATC CTAATCGGAT GTTACTTGCT GAGGCGAATC AATGGCCAGA AGATGCCGCC GCCTATTACG GAAATGGGGA TGAATGTCAC ATGAATTTCC ATTTTCCCCT CATGCCTCGC CTGTTTATGT CTGTGCGAAT GGAAGATAAT TTTCCCATTA TTGACATCCT CGAACAAACT CCGCCTATTC CCGATAACTG TCAATGGGGC TTATTTCTCC GCAACCATGA TGAATTAACC CTAGAAATGG TGACAGACGA AGACCGGGAT TTTATGTATC GGGTTTATGC TCAAGATACC CAAATGCGCG TAAATTTGGG AATTCGTCGC CGGTTAGCTC CGCTTTTAGG CAACGATCGC CGTCAGATAG AATTACTGAA TAGTCTGCTC TTATCTTTAC CCGGAACCCC CGTTTTATAC TATGGGGATG AGATAGGCAT GGGAGATAAC GTCTATTTAG GCGATCGCAA TGGAGTCCGG ACACCCATGC AATGGAGTAG TGATCGCAAT GCCGGATTTA GTCGGGCGAA CTCTCAACGG TTATACTTAC CCGTCGTGGT AGACTCGGAA TATTACTATG AATCAGTCAA TGTAGAAGTC CAACGGGCTA ACCCTAATTC CCTCTGGTAT GCGATCAAAC GTCTCATTGC TACCCGGAAA CGGTTTCAAG CTATCGGGAA AGGGTCTTTT GAAATCTTAC ACCCAGAAAA CCGCAAAGTT TTAGCCTTTA TTCGTTCCTA TGAAGATGAA CATATTTTAG TCATTGCCAA TTTATCCCGG TTCGTCCAAA CGGTAGAATT AGACTTGACA GACTTTAAAG GAGCAATTCC TGTAGAAATT TTCGGGCGTA CCGAGTTCCC CCCCATCGGA GAATATCCTT ATTTTCTCAG TATTAGCCCC TATGCCTTCT ATTGGTTTAT TCTTAAACCC CAACTGAGTC CCACATTACT CCCAAAATCT CAAGATCGAC TCCCAATTAT TATCTATACT AATCGTTGGC CAGAAATTTT GATTAAACGG GAATTAAACG CTACCTTAGA AAAAGCTTTA TCCGATTATC TCAAAAATTG TTACTGGTTT GATGGTAAAG ACCGCAAAAT CCAATCGGTT CACAATGAAG ATGTGGTTTC TATTCCTTAC AATGGAAGCG AAGCTCAAAT AGTCGGAGTC AAAATTGATT ATATTGAAGG AGAACCTCAA ACCTATCTCC TATTATTAGC TCACGCCGAA GGAGATCAAG CTATTCATCT CTTAGCAGAA ACCCCTCAAA GTGTCGTCTG TCATCTACGG GGAAAAGATA GCGATCGGGT GGAGATTTTA TATGTCGCCC TCGCTGATCC TCACTTTTTA AGCGACTTAC TCAAAGCGAT CGCCCAACAA CGCATCTTTG GAAGTAGTAG CGGTGGCAAG CTAATGTTCA CCAGAACCGA AAGATTCCCA GATACGGAAG AACTTTCCGA ATATCGCCCC GTTCCCTTGA TCGAAGAAGA ACAACGCAAC AGTTGTATTA TTTACGGAGA GCGGTTAATG CTGAAAATCT TCCGTAAACT CGATGAAGGC ATGAATCCGG ATCTAGAAAT CCGACGGTTT TTGAGCAAAA AGCAACAGTT AAACCATTTT GCACCCTTAG CCGGCAGTTT AGAGTATAAT CGCTCCGGCA ATCCCAAATC AATGACCGTA GCAATATTAC AGGAATATAT TCCCCATGCC CGTAACGGTT GGCATTATAC TTTAGATAGT TTACGGGACT ATTTTGAGCG AGTCATGATC CAACAAGCGG ACTTAGCCGA AGTGCCCACT AATCCTAGTT CTCTGTTAGA ATTACAAAAA TTCGACCTTC CCGAACTCGC TCACGAAACG ATCGGATCAT ATTTAGCGAG TGCCCAATTA TTAGGACAAA GTACCGCCGA TCTTCATGTT ACCTTAGCCA GTGATTGGGA AAACCCCGAT TTTGTCCCAG AACCCTTTTC CTCTCTTTAT CAGCGTTCAA TTTATCAATC TGCCCGAAAT TTAACCGGAC AAACCTTTCG AGAGTTAAAA CGAAAACAGT CGTTATTTTC CCCAGAGGTT CAAAATTTGG CTCATTCTGT TCTGACGCGA CAAGATAGGA TTTTTAAATC TTTTCAAACC CTTTTAGAGC AAAAAATTAC CGCCCTGAGA ACCCGATGTC ACGGAGATTA TCATTTAAAG CAAGTGCTTT ATACCGGTAA GGATTTTATC ATTATTGACT TTGAGGGAGA TCCGGCTCGT AGCTTAAATG AACGACGCAT GAAGCGATCG CCGTTGCGAG ATGTAGCAGA AATGTTACAA TCGTTTAGTT ATGCTGTGGA AGTCGCCTTA CAACGAGAGG TAGAAAGCGG AATGATTACT CCCGATCGCT TACCGATCAT TCAACAATGG GCACAATTTT GGACTTGTTG GGTAAGTACG GCGTTCTTAA AAACTTATTT AGCGACGGCG AGTCAGGATT CTTTTTTACC TAAAACCGAG CAAGAATTAC AAATTTTATT AGATAGTTAT CTCTTAGAGA GAATGATCTA TAGCCTCAAT TACGAACTCC AAAACCGTCC TCATCGAGTA GGAATTATCT TACAACAGAT TCTCCGTTTA TAA
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Protein sequence | MSSKLQETSM RDTLLNWTAT QKQTSMLKDD PLWFKNAIIY EVPVRAFADS NGDGIGDFKG LTQKLDYLQD LGVSAVWVLP FFPSPLKDDG YDISDYNNVN PIYGTLEDFK EFLNAAHQRG IRVIIELIVN HTSDTHPWFQ RARRAPKGSV ERDFYVWSDT PDKYREARII FQDFESSNWS WDSVANAYYW HRFYSHQPDL NYDNPAVRQA VFEVLDFWLS MGVDGLRLDA VPYLYERDGT NCENLPETHQ ILKDLRQYID QKYPNRMLLA EANQWPEDAA AYYGNGDECH MNFHFPLMPR LFMSVRMEDN FPIIDILEQT PPIPDNCQWG LFLRNHDELT LEMVTDEDRD FMYRVYAQDT QMRVNLGIRR RLAPLLGNDR RQIELLNSLL LSLPGTPVLY YGDEIGMGDN VYLGDRNGVR TPMQWSSDRN AGFSRANSQR LYLPVVVDSE YYYESVNVEV QRANPNSLWY AIKRLIATRK RFQAIGKGSF EILHPENRKV LAFIRSYEDE HILVIANLSR FVQTVELDLT DFKGAIPVEI FGRTEFPPIG EYPYFLSISP YAFYWFILKP QLSPTLLPKS QDRLPIIIYT NRWPEILIKR ELNATLEKAL SDYLKNCYWF DGKDRKIQSV HNEDVVSIPY NGSEAQIVGV KIDYIEGEPQ TYLLLLAHAE GDQAIHLLAE TPQSVVCHLR GKDSDRVEIL YVALADPHFL SDLLKAIAQQ RIFGSSSGGK LMFTRTERFP DTEELSEYRP VPLIEEEQRN SCIIYGERLM LKIFRKLDEG MNPDLEIRRF LSKKQQLNHF APLAGSLEYN RSGNPKSMTV AILQEYIPHA RNGWHYTLDS LRDYFERVMI QQADLAEVPT NPSSLLELQK FDLPELAHET IGSYLASAQL LGQSTADLHV TLASDWENPD FVPEPFSSLY QRSIYQSARN LTGQTFRELK RKQSLFSPEV QNLAHSVLTR QDRIFKSFQT LLEQKITALR TRCHGDYHLK QVLYTGKDFI IIDFEGDPAR SLNERRMKRS PLRDVAEMLQ SFSYAVEVAL QREVESGMIT PDRLPIIQQW AQFWTCWVST AFLKTYLATA SQDSFLPKTE QELQILLDSY LLERMIYSLN YELQNRPHRV GIILQQILRL
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