Gene PCC7424_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2917 
Symbol 
ID7108462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3246210 
End bp3249602 
Gene Length3393 bp 
Protein Length1130 aa 
Translation table11 
GC content42% 
IMG OID643481161 
Producttrehalose synthase 
Protein accessionYP_002378189 
Protein GI218439860 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA AATTACAAGA AACCAGCATG AGGGATACAC TATTAAATTG GACAGCAACC 
CAAAAACAAA CTTCTATGTT AAAAGACGAT CCTTTATGGT TTAAAAATGC TATTATTTAT
GAAGTGCCTG TTCGCGCCTT TGCTGACAGT AATGGTGATG GTATTGGTGA CTTTAAAGGA
TTAACCCAAA AGTTAGATTA TCTACAAGAT TTAGGGGTGA GTGCAGTCTG GGTATTACCG
TTTTTTCCTT CGCCCCTTAA AGATGATGGC TATGATATTA GCGATTATAA TAATGTTAAT
CCCATTTATG GAACTTTAGA AGATTTTAAA GAATTTCTTA ATGCGGCACA TCAGCGAGGA
ATTCGCGTCA TTATTGAATT AATTGTCAAT CATACCTCCG ACACTCATCC CTGGTTTCAA
CGCGCCCGTC GTGCCCCTAA AGGCAGCGTA GAACGGGATT TTTATGTGTG GAGTGATACC
CCCGATAAAT ATCGAGAAGC GCGGATTATT TTCCAAGATT TTGAATCGTC TAATTGGTCT
TGGGACTCCG TCGCCAATGC TTATTATTGG CATCGATTTT ACTCCCATCA ACCCGATTTA
AATTATGATA ATCCTGCCGT CCGGCAAGCG GTTTTTGAAG TGTTGGATTT TTGGTTAAGT
ATGGGAGTAG ATGGGTTAAG ATTAGATGCA GTTCCCTATC TATATGAGCG AGATGGGACG
AACTGCGAAA ACCTCCCAGA AACTCACCAA ATTTTAAAAG ATTTACGTCA ATATATCGAT
CAAAAATATC CTAATCGGAT GTTACTTGCT GAGGCGAATC AATGGCCAGA AGATGCCGCC
GCCTATTACG GAAATGGGGA TGAATGTCAC ATGAATTTCC ATTTTCCCCT CATGCCTCGC
CTGTTTATGT CTGTGCGAAT GGAAGATAAT TTTCCCATTA TTGACATCCT CGAACAAACT
CCGCCTATTC CCGATAACTG TCAATGGGGC TTATTTCTCC GCAACCATGA TGAATTAACC
CTAGAAATGG TGACAGACGA AGACCGGGAT TTTATGTATC GGGTTTATGC TCAAGATACC
CAAATGCGCG TAAATTTGGG AATTCGTCGC CGGTTAGCTC CGCTTTTAGG CAACGATCGC
CGTCAGATAG AATTACTGAA TAGTCTGCTC TTATCTTTAC CCGGAACCCC CGTTTTATAC
TATGGGGATG AGATAGGCAT GGGAGATAAC GTCTATTTAG GCGATCGCAA TGGAGTCCGG
ACACCCATGC AATGGAGTAG TGATCGCAAT GCCGGATTTA GTCGGGCGAA CTCTCAACGG
TTATACTTAC CCGTCGTGGT AGACTCGGAA TATTACTATG AATCAGTCAA TGTAGAAGTC
CAACGGGCTA ACCCTAATTC CCTCTGGTAT GCGATCAAAC GTCTCATTGC TACCCGGAAA
CGGTTTCAAG CTATCGGGAA AGGGTCTTTT GAAATCTTAC ACCCAGAAAA CCGCAAAGTT
TTAGCCTTTA TTCGTTCCTA TGAAGATGAA CATATTTTAG TCATTGCCAA TTTATCCCGG
TTCGTCCAAA CGGTAGAATT AGACTTGACA GACTTTAAAG GAGCAATTCC TGTAGAAATT
TTCGGGCGTA CCGAGTTCCC CCCCATCGGA GAATATCCTT ATTTTCTCAG TATTAGCCCC
TATGCCTTCT ATTGGTTTAT TCTTAAACCC CAACTGAGTC CCACATTACT CCCAAAATCT
CAAGATCGAC TCCCAATTAT TATCTATACT AATCGTTGGC CAGAAATTTT GATTAAACGG
GAATTAAACG CTACCTTAGA AAAAGCTTTA TCCGATTATC TCAAAAATTG TTACTGGTTT
GATGGTAAAG ACCGCAAAAT CCAATCGGTT CACAATGAAG ATGTGGTTTC TATTCCTTAC
AATGGAAGCG AAGCTCAAAT AGTCGGAGTC AAAATTGATT ATATTGAAGG AGAACCTCAA
ACCTATCTCC TATTATTAGC TCACGCCGAA GGAGATCAAG CTATTCATCT CTTAGCAGAA
ACCCCTCAAA GTGTCGTCTG TCATCTACGG GGAAAAGATA GCGATCGGGT GGAGATTTTA
TATGTCGCCC TCGCTGATCC TCACTTTTTA AGCGACTTAC TCAAAGCGAT CGCCCAACAA
CGCATCTTTG GAAGTAGTAG CGGTGGCAAG CTAATGTTCA CCAGAACCGA AAGATTCCCA
GATACGGAAG AACTTTCCGA ATATCGCCCC GTTCCCTTGA TCGAAGAAGA ACAACGCAAC
AGTTGTATTA TTTACGGAGA GCGGTTAATG CTGAAAATCT TCCGTAAACT CGATGAAGGC
ATGAATCCGG ATCTAGAAAT CCGACGGTTT TTGAGCAAAA AGCAACAGTT AAACCATTTT
GCACCCTTAG CCGGCAGTTT AGAGTATAAT CGCTCCGGCA ATCCCAAATC AATGACCGTA
GCAATATTAC AGGAATATAT TCCCCATGCC CGTAACGGTT GGCATTATAC TTTAGATAGT
TTACGGGACT ATTTTGAGCG AGTCATGATC CAACAAGCGG ACTTAGCCGA AGTGCCCACT
AATCCTAGTT CTCTGTTAGA ATTACAAAAA TTCGACCTTC CCGAACTCGC TCACGAAACG
ATCGGATCAT ATTTAGCGAG TGCCCAATTA TTAGGACAAA GTACCGCCGA TCTTCATGTT
ACCTTAGCCA GTGATTGGGA AAACCCCGAT TTTGTCCCAG AACCCTTTTC CTCTCTTTAT
CAGCGTTCAA TTTATCAATC TGCCCGAAAT TTAACCGGAC AAACCTTTCG AGAGTTAAAA
CGAAAACAGT CGTTATTTTC CCCAGAGGTT CAAAATTTGG CTCATTCTGT TCTGACGCGA
CAAGATAGGA TTTTTAAATC TTTTCAAACC CTTTTAGAGC AAAAAATTAC CGCCCTGAGA
ACCCGATGTC ACGGAGATTA TCATTTAAAG CAAGTGCTTT ATACCGGTAA GGATTTTATC
ATTATTGACT TTGAGGGAGA TCCGGCTCGT AGCTTAAATG AACGACGCAT GAAGCGATCG
CCGTTGCGAG ATGTAGCAGA AATGTTACAA TCGTTTAGTT ATGCTGTGGA AGTCGCCTTA
CAACGAGAGG TAGAAAGCGG AATGATTACT CCCGATCGCT TACCGATCAT TCAACAATGG
GCACAATTTT GGACTTGTTG GGTAAGTACG GCGTTCTTAA AAACTTATTT AGCGACGGCG
AGTCAGGATT CTTTTTTACC TAAAACCGAG CAAGAATTAC AAATTTTATT AGATAGTTAT
CTCTTAGAGA GAATGATCTA TAGCCTCAAT TACGAACTCC AAAACCGTCC TCATCGAGTA
GGAATTATCT TACAACAGAT TCTCCGTTTA TAA
 
Protein sequence
MSSKLQETSM RDTLLNWTAT QKQTSMLKDD PLWFKNAIIY EVPVRAFADS NGDGIGDFKG 
LTQKLDYLQD LGVSAVWVLP FFPSPLKDDG YDISDYNNVN PIYGTLEDFK EFLNAAHQRG
IRVIIELIVN HTSDTHPWFQ RARRAPKGSV ERDFYVWSDT PDKYREARII FQDFESSNWS
WDSVANAYYW HRFYSHQPDL NYDNPAVRQA VFEVLDFWLS MGVDGLRLDA VPYLYERDGT
NCENLPETHQ ILKDLRQYID QKYPNRMLLA EANQWPEDAA AYYGNGDECH MNFHFPLMPR
LFMSVRMEDN FPIIDILEQT PPIPDNCQWG LFLRNHDELT LEMVTDEDRD FMYRVYAQDT
QMRVNLGIRR RLAPLLGNDR RQIELLNSLL LSLPGTPVLY YGDEIGMGDN VYLGDRNGVR
TPMQWSSDRN AGFSRANSQR LYLPVVVDSE YYYESVNVEV QRANPNSLWY AIKRLIATRK
RFQAIGKGSF EILHPENRKV LAFIRSYEDE HILVIANLSR FVQTVELDLT DFKGAIPVEI
FGRTEFPPIG EYPYFLSISP YAFYWFILKP QLSPTLLPKS QDRLPIIIYT NRWPEILIKR
ELNATLEKAL SDYLKNCYWF DGKDRKIQSV HNEDVVSIPY NGSEAQIVGV KIDYIEGEPQ
TYLLLLAHAE GDQAIHLLAE TPQSVVCHLR GKDSDRVEIL YVALADPHFL SDLLKAIAQQ
RIFGSSSGGK LMFTRTERFP DTEELSEYRP VPLIEEEQRN SCIIYGERLM LKIFRKLDEG
MNPDLEIRRF LSKKQQLNHF APLAGSLEYN RSGNPKSMTV AILQEYIPHA RNGWHYTLDS
LRDYFERVMI QQADLAEVPT NPSSLLELQK FDLPELAHET IGSYLASAQL LGQSTADLHV
TLASDWENPD FVPEPFSSLY QRSIYQSARN LTGQTFRELK RKQSLFSPEV QNLAHSVLTR
QDRIFKSFQT LLEQKITALR TRCHGDYHLK QVLYTGKDFI IIDFEGDPAR SLNERRMKRS
PLRDVAEMLQ SFSYAVEVAL QREVESGMIT PDRLPIIQQW AQFWTCWVST AFLKTYLATA
SQDSFLPKTE QELQILLDSY LLERMIYSLN YELQNRPHRV GIILQQILRL