| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2825 |
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| Symbol | |
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| ID | 7111094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3138342 |
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| End bp | 3139328 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643481071 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_002378100 |
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| Protein GI | 218439771 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000598465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCACTG CTAAAGTCAA CCCCAAAACT CAAAAACCGA CATTCTCAGC AGATATGGTT
AGAACTTATT TGCACGAGAT TGGGCGAGTA CCCTTGTTAA CCCATGAGCA AGAGATTGTC
TATGGTAAAC AAGTCCAAAA AATGATGACT CTGTTAGAAA AGAAAGACCA ACTGGCGATT
GAGCTAGGAA AAGAGCCAAA TCTGACAGAG TGGGCTAACC AAGTTCAAAT GAGTGAAGAA
GAACTCAATA GAGCGATACA ACAAGGGAAA CGGGCAAAAC GAAAAATGAT CGAGGCGAAT
TTGCGACTGG TAGTAGCGAT CGCTAAAAAA TACCAAAAGC GCAATATGGA ATTTCTCGAT
CTGATACAAG AAGGAAGTTT AGGATTAGAA AGAGGGGTAG AAAAATTTGA CCCCACTAAA
GGATACAAGT TTTCTACTTA TGCTTATTGG TGGATTCGCC AAGCGATTAC CCGTGCGATC
GCCCAACAAG CCCGCACCAT CCGCTTACCG ATTCACATTA CAGAAAAACT TAATAAAATT
AAGAAAACAC AACGAGAATT GTCCCAACAA TTAGGACGGA GTGCAACACC AGCCGAAATT
GCCAAAGCGT TAGATTTAGA ACCGGCTCAA ATTCGAGAAT TCTTGAGTAT GTCTCGTCAA
CCCATCTCTT TAGATGTGAG AGTCGGAGAT AACCAAGATA CAGAACTATC AGAGTTACTC
GAAGATGAGG GGATATCGCC TGATAATTAC ATTACCCAGG AATTAATGAG ACAAGATCTC
CATGATTTAC TGGCAGAATT AACCCCGCAA CAACGAGAAG TTTTATCTCT ACGGTTTGGA
TTACAAGACG GCAAAGAACT TTCCTTGGCC AAAATCGGAC AAAGAATGAA TATTAGTCGT
GAGCGGGTAC GACAGTTAGA ACATCAGGCT TTAAGTCAAT TACGCCGTCG ACGTTCCAAC
GTTAAAGAAT ATATCGTAGC CAGCTAG
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| Protein sequence | MPTAKVNPKT QKPTFSADMV RTYLHEIGRV PLLTHEQEIV YGKQVQKMMT LLEKKDQLAI
ELGKEPNLTE WANQVQMSEE ELNRAIQQGK RAKRKMIEAN LRLVVAIAKK YQKRNMEFLD
LIQEGSLGLE RGVEKFDPTK GYKFSTYAYW WIRQAITRAI AQQARTIRLP IHITEKLNKI
KKTQRELSQQ LGRSATPAEI AKALDLEPAQ IREFLSMSRQ PISLDVRVGD NQDTELSELL
EDEGISPDNY ITQELMRQDL HDLLAELTPQ QREVLSLRFG LQDGKELSLA KIGQRMNISR
ERVRQLEHQA LSQLRRRRSN VKEYIVAS
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