Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2821 |
Symbol | |
ID | 7111090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3134205 |
End bp | 3135890 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643481067 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_002378096 |
Protein GI | 218439767 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00495915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGATA ATTATAGAAG TCGCATCATT ACTGAAGGGA GTCAACGCAC TCCTAACCGG GCTATGCTTC GCGCCGTTGG ATTTGGAGAT GATGACTTTA CTAAACCCAT AGTGGGCATT GCTAACGGAT ATAGCACGAT TACCCCTTGT AATATGGGGA TTAATGACCT GGCACTAAGG GCCGAAGACG GACTGAAAAA AGCGGGAGCT ATGCCCCAAA TTTTTGGCAC AATTACCATC AGTGATGGGA TTTCTATGGG AACAGAAGGG ATGAAATATT CTCTTGTCTC TAGGGATGTA ATCGCCGACT CCATCGAAAC TGTCTGTAAT GGTCAAAGTA TGGATGGAGT TATAGCGATC GGGGGTTGTG ATAAAAATAT GCCCGGAGCT ATGATTGCTA TGGCGAGAAT GAATATTCCG GCGATTTTTG TTTATGGAGG CACAATTAAA CCCGGACACT ACAATGGAGA AGATTTAACT GTTGTGAGTG CTTTTGAAGC TGTCGGACAA TATAGCGCGG GTAAAATAGA CGATGCCCAG TTATCAGGAA TTGAACGCAA TGCCTGTCCG GGGGCGGGTT CTTGTGGGGG TATGTTTACC GCTAATACCA TGTCTTCTGC GTTTGAAGTG ATGGGGATGA GTCTTCCCTA TTCCTCTACA ATGGCGGCAG AAGATGCAGA AAAAGCCGAT AGTACCGAAA AATCCGCTTT TGTTTTAGTG GAGGCGATTA AAAAACAAAT TCTCCCCCGT CAGATTTTAA CTCGCAAAGC TTTTGAGAAT GCTATCTCGG TGATTATGGC GGTTGGCGGT TCGACCAATT CGGTTTTACA TTTATTGGCG ATCGCTCATA CCATAGGGGT AGAACTGAGT TTAGATGACT TTGAAACCAT TAGAAAGCGA GTGCCGGTCA TTTGTGACCT GAAACCCTCT GGACGCTACG TTACGGTTAA TTTACATCAA GCTGGTGGTA TTCCTCAAGT GATGAAAATG CTGTTAGTCC ATGACTTATT ACATGGGGAT GCTTTAACTA TTACCGGACA AACCATTGCA GAAGTTTTAA AAGATGTCCC CGATGAACCC CCTCTAGGTC AAGATGTGAT TCGTCCTTGG GATAACCCCG TTTACCAAGA AGGACACCTA GCTATTTTAA AAGGAAACTT AGCTACAGAG GGAGCAGTAG CTAAAATTAG TGGGGTCAAA GTTCCTAAAA TTACTGGACC TGCCCGGGTC TTTGAATCAG AAGAAAGTTG TTTAGAAGCC ATTCTTGCCA AGAGAATTAA GCCGGGAGAT GTGATTATCG TCCGTTATGA AGGGCCAAAA GGAGGCCCCG GAATGCGGGA AATGTTAGCG CCTACCTCTG CTATTATTGG GGCAGGATTA GGGGATACAG TGGGATTAAT TACCGATGGG CGTTTTTCTG GAGGAACTTA CGGCATGGTC GTTGGTCATG TTGCTCCTGA AGCCGCAGTA GGCGGTACTA TTGCCCTCGT AGAAGAAGGC GATACGATCA CCATTGATGC TCATCAACGC TTATTACAGC TTAATGTGTC TGATGAAGAA TTAGCCCGTC GTCGTGCTAA GTGGCAACCC CCTCAACCTC GGTATACAAC AGGGGTATTG GCTAAGTATG CTAAATTAGT CTCTTCGAGT AGTATCGGGG CAGTGACGGA TAAAGATTTA TTTTAA
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Protein sequence | MSDNYRSRII TEGSQRTPNR AMLRAVGFGD DDFTKPIVGI ANGYSTITPC NMGINDLALR AEDGLKKAGA MPQIFGTITI SDGISMGTEG MKYSLVSRDV IADSIETVCN GQSMDGVIAI GGCDKNMPGA MIAMARMNIP AIFVYGGTIK PGHYNGEDLT VVSAFEAVGQ YSAGKIDDAQ LSGIERNACP GAGSCGGMFT ANTMSSAFEV MGMSLPYSST MAAEDAEKAD STEKSAFVLV EAIKKQILPR QILTRKAFEN AISVIMAVGG STNSVLHLLA IAHTIGVELS LDDFETIRKR VPVICDLKPS GRYVTVNLHQ AGGIPQVMKM LLVHDLLHGD ALTITGQTIA EVLKDVPDEP PLGQDVIRPW DNPVYQEGHL AILKGNLATE GAVAKISGVK VPKITGPARV FESEESCLEA ILAKRIKPGD VIIVRYEGPK GGPGMREMLA PTSAIIGAGL GDTVGLITDG RFSGGTYGMV VGHVAPEAAV GGTIALVEEG DTITIDAHQR LLQLNVSDEE LARRRAKWQP PQPRYTTGVL AKYAKLVSSS SIGAVTDKDL F
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