| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2820 |
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| Symbol | |
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| ID | 7111089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3132267 |
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| End bp | 3133523 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643481066 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002378095 |
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| Protein GI | 218439766 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.075955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA CTATTTTTTC AAGCCAGATA AACGACGATT ATACCCCATT GACTGACACT
TTGTTGAAGT CCAATCCCAA AATAGAAATG GCTATTGAGA TAGAAGAAAA TCCTCTGCTA
GAAGCCGATT TTACAGAGAC AGAGATAACC CCATCAAGCC CGACTCAAAC CCGGTCAACA
ACGGATTTAG TGAGATTATA TTTACAAGAT ATCGGTCGAG TTCCTTTACT CAAAAAAGAC
GAAGAAGTCC AAAATGCTCA AGAGCTACAA CGCTATATGC AATTATTAGA ACTGCGGTCA
AGTGCAGTCA AAAAGGGAGA CTTAACCCTC AATACTTTTG TTAATTTAGT GGAAAAACGA
GATCAATTAA CCTCTCAATT AGGTCATCGT CCTTCTTTAG AAAAATGGGC TGATGCGGCT
GAAGTCAGTG TTTTTGAAGT TAAACAAATT TTAAATGAAG GAAAACGTCA CTGGGCTAAT
TTAGCCGGTC TTAAGGTTCA AGAATTAGAG CAAATTCAAA AAGCAGGAAT TGAGGCTAAA
AATCACATGA TTAAAGCTAA CCTGCGCTTA GTGGTGTCAG TGGCTAAACG ATATCAAAAT
CGGGGCTTAG AATTACTGGA TTTAATTCAA GAAGGCACTT TAGGATTAGA ACGCGCTGTC
GAGAAATTTG ACCCCACAAA AGGGTATCGT TTTAGTACCT ATGCCTATTG GTGGATTCGT
CAAGGAATAA CTAGAGCGAT CGCTACTCAA AGTCGGATTA TTCGTTTACC GGTTCATATT
ACCGAAAAAC TCAACAAAAT TAAAAAAGCT CAACGGAAAA TGGCGCAAAT TAAAGGCAGA
ACTCCCACAA TGGAAGAACT AGCTGTAGAA GTTGATATGA CTGCGCCTCA AATTCGAGAA
GTCTTAATGC GAGTTCCCCG CTCAGTTTCT TTAGAAATTA AGGTAGGGAA AGAAAAAGAT
ACCGAACTGG TAGACTTATT AGAAACAACT GAAGCGTCTC CAGAAGAGAG CTTAGTTAAT
GAAACACTCC GACAAGATTT ACAAAATTTA TTAGCTGATC TGACAACGCG AGAAAGAGAA
GTCATTCAAA TGCGCTATGG CTTTAAAGAC GGAAAATGTT ATTCTCTGGC GGATATTGGC
CGAGCTTTAC AGTTGTCACG GGAACGAGTT AGACAAATTG AAGCAAAAGC GATCCAAAAA
TTACGGCAAC CCAAACGTCG CAATCAAATT CGGGACTATT TTGAAGCATT AAAATAA
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| Protein sequence | MTATIFSSQI NDDYTPLTDT LLKSNPKIEM AIEIEENPLL EADFTETEIT PSSPTQTRST
TDLVRLYLQD IGRVPLLKKD EEVQNAQELQ RYMQLLELRS SAVKKGDLTL NTFVNLVEKR
DQLTSQLGHR PSLEKWADAA EVSVFEVKQI LNEGKRHWAN LAGLKVQELE QIQKAGIEAK
NHMIKANLRL VVSVAKRYQN RGLELLDLIQ EGTLGLERAV EKFDPTKGYR FSTYAYWWIR
QGITRAIATQ SRIIRLPVHI TEKLNKIKKA QRKMAQIKGR TPTMEELAVE VDMTAPQIRE
VLMRVPRSVS LEIKVGKEKD TELVDLLETT EASPEESLVN ETLRQDLQNL LADLTTRERE
VIQMRYGFKD GKCYSLADIG RALQLSRERV RQIEAKAIQK LRQPKRRNQI RDYFEALK
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