| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2746 |
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| Symbol | |
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| ID | 7110855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3039835 |
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| End bp | 3043125 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643480997 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002378026 |
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| Protein GI | 218439697 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTAT CTGATGGATT TATTAAACGA CCTGTCTTAA CGACAGTGTG TAGTATTGTC
ATTGTCTTAG TTGGGACAAT TTGTATGGCT GTATTGCCCC TCGATAAATT GCCTCAGATT
GCCCCAAAAC AAATCGTCGT CTCCGCTAAC TATGTCGGTG CAGATGCTAA AACTACCGTT
GATAACGTAA CCACCCCCAT TGAGCGTCAA ATTAACGGGG TGGATTACAT GAGATGGATG
ACTTCTAACA CCGATAATAA TGGGAATTCC TCGATTTCTG TCTCGTTTCC GGTAGAAATC
GATCCTAACA CCGCTCAAGT TTTAGTGCAA AACCGAGTCG CTCAATCTAA CCAATTTTTA
CCTCAATCGG TTATTGCCAC CGGGGTTAAC ACTCGCAAAC AGTCCCCCAG TATTACCCTA
GTTTATGCGT TTTATTCAGA AACCGGAGCC GATGGGAAGC CGATTTATCC CATTTCCTTT
GTCAATAACT ATGTCGATCG TTATATTTGG AACGATTTGA GACGAATTGA AGGGGTAGGA
GATCTGGCTT TATTTGGGAG CGATATTTAT GCCATGCGGA TTTGGGTTGA TCCCGATAAA
CTCGCAGCGA GACAATTAGC GGCCTCAGAT GTCGTCAGAG CGATTCAACA ACAAAACTTT
GAGGTTGGAG CCGGTTCAGT CGGAGCGCAA CCTGCACCCC CAGAGCAACA ATTTCAAATC
CCTTTACGAG TTAAAGGACG GGTGTTAAGT CCAGAAGAAG CAGAAAATAT AGTCGTCAAA
GTCGGGGATA ATGGGACGCT GATCCGAGTT AAAGATATTG GTCGAGCAGA ATTAGGGTCA
CAATCTTACT CTACCTTAGC CTATTTAGAT GGAGATAATC CCGCAGTTGC CCTAGTCGTT
TATCAATTGC CGGGGTCAAA TGCTTTAGAT ACGGCGACGA ATATTAAAGC GAAAATGGCC
GAGTTAGAAG CCTCTTTTCC TCCGGGTATA AAATACGTTA TTACTCTTGA CAATACTTTA
TTTATTAATG CAGCCTTAAA AGATTTATCC GTAACCCTCT TACAAGCGGT TGCCTTAGTT
GTTTTAATTA TTTTTATTTT CTTACAAGAT TGGCGCACGA CCTTAATTCC AGCCATAGCG
ATTCCGGTAG CGCTCATTGG GTCGATGATT GGACTACAAG CGTTAGGATT TACCCTCAAT
CAGTTAACCC TATTTGCTTG CGTATTAGCA ACGGGTTTAG TAGTCGATGA TGGGATTGTG
ATTGTAGAAG CGGTTTCTAC CAAATTATCT CAGGGAATGC GCCCAGTACA AGCCGCCTTA
GATTCTATGG AGGAATTATT CGGGGCGACG ATTGCCACTA CATTAGTTTT ATTAGCGGTA
TTTATCCCGG TTTCTTTTTT CCCCGGCAGT ACCGGTATTG TTTACCGACA ATTTGCCTTA
GTCATTGTCT TTGCGATCAT TTTTTCTACC TTTAACGCCC TTACCTTTTC TCCTACCATG
TCTGGGGTGA TGTTGCGTCC TCCTCAACCG CCTCATGGCC CTTTAAGTTG GGTATTCCGA
GAATTTAATC GGCTGTTTGG CTGGATTCAA GGGGGATATC GAAGACTCAT TGAACTATTG
ACCCACATTA AACTGGTGAT TGTGGCGCTT TTTATCGGGG GAATTCTTCT CACCGCTTGG
ATGTACCAAA CCCTACCCCA GAGTTTTATT CCGGCAGAAG ACCAAGGGTT TTTATTTGGC
ATTATCGAAG CGCCTCCGGG GGTTTCTTTA AACTATACCG CTCAAGTGGG GAAAAGAGCC
TTAGCCGAGG TGATGCAGTT TGAAGAAGTG GAACATTCCC TCGCCTTGGT GGGTTTTTCT
TTTGATGGAC AAAATAGCAA TAAAGGGATT ATTTTTACGA AGCTTAGACC TTGGGATGAA
CGTCCTGGGG CGACTAGCTC CGCTTATGGG GTGATTAGAG GCTTAAATAG ATCCTTTCAG
CAAAGAATTG ATGACGCTAG AGTTTTCGCG GTTAATGCTC CGGCTGTGGA CGGATTAGGA
AATTTTGACG GGTTAGAACT CTATATCCAA GACCGTCAGT TAAGAGGGAT GGAAGCTTTA
ATTGATAACA CCAGACGGAT GATGCAAGCG GCTAACCAAC GTCCGGAAAT CGCTATGGCC
TTCACTACCT ATACCTTTGA TAGTCCGATG ATTGAGGCAG ATATTGACCG AGAAAAAGCC
AACGCTCAAA ATGTCGATAT TCAAGAAGTT CTCAACACCC TACAAACCTA TTTGGGGGCA
AATTTTGTCA ACCAATTTGT GCTTGATGGG CGACTCTATC GGGTATTTGT GCAAGCAGAA
GGCACTCAAC GGTCTAATCC TAAAGATATT GCTAGTCTTT ATGTTCGCTC TAGAGATGGG
GCGATGATCC AACTGAGTAA TATTCTCAGT GAAAATCCTA TTACTTATCC GCCTATTTTA
ACGAATTACA ACGTTTATCC GGCGATTAAA CTGATTATTT CTCCTGCACC TGGGTATAGT
ACGGGGGGAG CGATTCAAGT GATGGAAGAA CTGGCCGCCG CCACCTTACA GCCGGGTTTT
GGGTATGAAT GGACAAATAC CGCAGCCGAA GAAAAAGCCT CTGGAGGGGC AGCCCCGATC
GTTTTTGGGT TAGGCTTTGT CATGGTATTT TTAGTGTTGG CGGCTCAGTA TGAGAGTTAT
GTTGACCCGA CGATTATTAT GATTACTGTG CCCTTATCGA TTTTAGGAGC ATTAGGGGGA
ATTTGGCTAA GAGCAACCTT GATTCAACCG TTAGCAGGGG GTATTTATCC CACTCTCAAC
AGTAATATGT ATGTTCAGGT TGCTTTGGTG ATGTTGATTG GGTTAGCCAG TAAAAACGCG
ATTCTGATTG TGGAATTTGC CAATCAGGCG AAAGAATTAG GGATGAATAT TACTCAAGCG
GCTATTTATG CAGCAGAGCA ACGATTTCGT CCGATTATGA TGACGGTTAT TTCTTCTCTA
GTCGGGTTCT TTCCCTTGTT GGTGGCTCAA GGGGCAGGGG CGGTTAGCCG TTGGTCTTTA
GGAACGGCGA TTTTTGGAGG ATTATTAATT TCTACTCTGT TAAGCTTGCT CTTTGTTCCC
AACTTGTATA TTGTCATCAA AAGTCTAGAG GAAAACTTCC TTAAAGGCGG TGGCAAACCT
CCTAAAACTG GCCTGTCTCA AAGAGTTACC GGGTCATCCT CTTCCCAAGA GCCTCAATTT
TCTGAGCAAG ATGGAATCCC CCATTACAAA GCCTCTCCTC AAAATGAGTA A
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| Protein sequence | MSLSDGFIKR PVLTTVCSIV IVLVGTICMA VLPLDKLPQI APKQIVVSAN YVGADAKTTV
DNVTTPIERQ INGVDYMRWM TSNTDNNGNS SISVSFPVEI DPNTAQVLVQ NRVAQSNQFL
PQSVIATGVN TRKQSPSITL VYAFYSETGA DGKPIYPISF VNNYVDRYIW NDLRRIEGVG
DLALFGSDIY AMRIWVDPDK LAARQLAASD VVRAIQQQNF EVGAGSVGAQ PAPPEQQFQI
PLRVKGRVLS PEEAENIVVK VGDNGTLIRV KDIGRAELGS QSYSTLAYLD GDNPAVALVV
YQLPGSNALD TATNIKAKMA ELEASFPPGI KYVITLDNTL FINAALKDLS VTLLQAVALV
VLIIFIFLQD WRTTLIPAIA IPVALIGSMI GLQALGFTLN QLTLFACVLA TGLVVDDGIV
IVEAVSTKLS QGMRPVQAAL DSMEELFGAT IATTLVLLAV FIPVSFFPGS TGIVYRQFAL
VIVFAIIFST FNALTFSPTM SGVMLRPPQP PHGPLSWVFR EFNRLFGWIQ GGYRRLIELL
THIKLVIVAL FIGGILLTAW MYQTLPQSFI PAEDQGFLFG IIEAPPGVSL NYTAQVGKRA
LAEVMQFEEV EHSLALVGFS FDGQNSNKGI IFTKLRPWDE RPGATSSAYG VIRGLNRSFQ
QRIDDARVFA VNAPAVDGLG NFDGLELYIQ DRQLRGMEAL IDNTRRMMQA ANQRPEIAMA
FTTYTFDSPM IEADIDREKA NAQNVDIQEV LNTLQTYLGA NFVNQFVLDG RLYRVFVQAE
GTQRSNPKDI ASLYVRSRDG AMIQLSNILS ENPITYPPIL TNYNVYPAIK LIISPAPGYS
TGGAIQVMEE LAAATLQPGF GYEWTNTAAE EKASGGAAPI VFGLGFVMVF LVLAAQYESY
VDPTIIMITV PLSILGALGG IWLRATLIQP LAGGIYPTLN SNMYVQVALV MLIGLASKNA
ILIVEFANQA KELGMNITQA AIYAAEQRFR PIMMTVISSL VGFFPLLVAQ GAGAVSRWSL
GTAIFGGLLI STLLSLLFVP NLYIVIKSLE ENFLKGGGKP PKTGLSQRVT GSSSSQEPQF
SEQDGIPHYK ASPQNE
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