Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2671 |
Symbol | hemE |
ID | 7109058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2953685 |
End bp | 2954746 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643480922 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002377951 |
Protein GI | 218439622 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.181527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAT CAGCCGAAAT CCCTTATCTT TTAAGGGCTG CTCGTGGTGA AGTGTTAGAC CGTCCTCCCG TGTGGATGAT GCGTCAAGCC GGGCGTTATA TGAAAGTTTA TCGGGATTTA CGGGATAAAT ACCCCAGTTT TCGGGAAAGA TCAGAAAATG CTGACCTAGC CATCGAAATT TCTCTACAAC CTTGGCGGGC GTTTCAACCG GATGGGGTGA TCATGTTCTC TGATATTTTA ACTCCCCTCC CCGGCATCGG CATTCCTTTT GATATTATCG AAAGCAAAGG CCCCATTATT GACCCTCCTA TCCGTACTCA ACAACAGATC GATCATCTTC ATCCTTTCGA CCCCGATCAA ACTGTTCCTT TTGTCAAGAC TATCTTAAAA ACTCTTCGTC AAGAAGTCGG CAATCAATCG ACGGTTTTAG GGTTTGTCGG CGCTCCTTGG ACGCTTGCCG CTTATGCTGT TGAAGGGAAA AGCTCTAAAA CTTATTCTAT TATTAAAAGC ATGGCTTTCT CAGAACCGGC TATCCTCCAT CAATTGTTGA GTAAATTGGC GGATATGGTG GCGAGTTACG TCCGTTATCA AATTGATTGT GGAGCGCAAG TAGTACAGAT GTTTGATTCT TGGGCGGGTC AATTAACCCC TCAAGATTAT GATGTGTTTG CCTTACCCTA TCAACAACAA GTGGTGCGTC AGGTTAAAGA AACTCATCCT GATACTCCCC TAATTCTCTA CATTAGTGGC AGTGCTGGAG TATTAGAAAG AATGGGTAAG TCTGGGGTTG ACATGATCAG TGTTGACTGG ACAGTGGATA TGGCAGAAGC TCGACAACGC CTTGGTAAAG AGATGAAAGT TCAAGGTAAT ATTGATCCGG GAGTATTATT TGGCTCTCAA AGTTTTATCC GCGATCGCAT TGTCGATACG ATCCGCAAAG CCGGCAACCA AGGACATATT TTAAACTTAG GTCATGGGGT TTTAGTGGGT ACTCCGGAAG ACAATGTGCG GTTTTTCTTT GAAACGGCCA AAAATGCCGA TCAATTACTG GTTCATGCCT AA
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Protein sequence | MSQSAEIPYL LRAARGEVLD RPPVWMMRQA GRYMKVYRDL RDKYPSFRER SENADLAIEI SLQPWRAFQP DGVIMFSDIL TPLPGIGIPF DIIESKGPII DPPIRTQQQI DHLHPFDPDQ TVPFVKTILK TLRQEVGNQS TVLGFVGAPW TLAAYAVEGK SSKTYSIIKS MAFSEPAILH QLLSKLADMV ASYVRYQIDC GAQVVQMFDS WAGQLTPQDY DVFALPYQQQ VVRQVKETHP DTPLILYISG SAGVLERMGK SGVDMISVDW TVDMAEARQR LGKEMKVQGN IDPGVLFGSQ SFIRDRIVDT IRKAGNQGHI LNLGHGVLVG TPEDNVRFFF ETAKNADQLL VHA
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