Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2443 |
Symbol | |
ID | 7110754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2724200 |
End bp | 2724859 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643480699 |
Product | CRISPR-associated protein, Cse3 family |
Protein accession | YP_002377731 |
Protein GI | 218439402 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.880295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTGA GTAAAATTGA ACTTAATATT AGAAGTTCTG CTGTGAGTAC CGACTTAAGT GATTGCCACA AATTGCATCA AAGAGTAATG CAAGGTTTTC CTAATGAAAA TAACCCTGAG TATCGAAGTG AAGCAAAAAT TCTCTATCGT TTAGAAGGTT CAATTCTTTT TGTTCAATCA AAAAATAAAC CAGATTGGAC TCAATTACCG AAAGGATATA CAGCCGAAGA AATCACAGAA ATGGATTATG AAAAAATCAA AAAAGGCGAC TATTTATACT TTCGCTTGTT AGGTAATCCT GTTCAACAAA CCACAAAACT TCGTACAGAT GATTCGGGGA ATATAATAAT GAAAAATAAT TCTGAGAAGC CGCAAAAAAA GACTGTTCGT CGTTTTCTTT CAAATAAAGA TGCACAAATT CAATGGTTAA TGAATCATTT GAAAGGGACA ATACTTCAGG AATGTTATGT CTCTGCCTCT AGCGACATTC GTGGACAATG CAAACAAAGC AAACGAATAT TTCTTAAAAC AGTTTTATTT GATGGGGTTC TACAAGTTAC CGACTCGGAA AGTTTTATTA AAGCATTACG AGAGGGGATT GGTAGGGGAC GGTCTTACGG ATGTGGGTTG CTCTCTATTG CTAAATTTAA TCCCAATTGA
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Protein sequence | MYLSKIELNI RSSAVSTDLS DCHKLHQRVM QGFPNENNPE YRSEAKILYR LEGSILFVQS KNKPDWTQLP KGYTAEEITE MDYEKIKKGD YLYFRLLGNP VQQTTKLRTD DSGNIIMKNN SEKPQKKTVR RFLSNKDAQI QWLMNHLKGT ILQECYVSAS SDIRGQCKQS KRIFLKTVLF DGVLQVTDSE SFIKALREGI GRGRSYGCGL LSIAKFNPN
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