Gene PCC7424_2442 details

Gene Information

• Locus tag: PCC7424_2442
• ID: 7110753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 2723566
• End bp: 2724213
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643480698
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_002377730
• Protein GI: 218439401
• TIGRFAM ID: [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 56
• Fosmid unclonability p-value: 0.844611
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGAAAA CACTTTTACT GAGGTTAGCA GGCCCCTTGC AATCTTGGGG ACGAGGATCT 
CGTTTTGACT TTCGTGATAC CGATACTATC CCGACCAAAT CTGGAGTCAT TGGTTTAGTT 
GCGGCTGCAA TGGGTATTAA CCGAGATAAT CAGGTAGAAT TAGCAAAACT AGCTCAATTA 
CGTATGGGAG TTTGTGTAGA AAAAGAAGGC AAACTCGTGG TTGACTATCA CACTGTAATT 
GGTACAATTC ATGCGGATGG AAAGCCTCAT AAAGCTCCAA TTCAGTCTTA TCGACAATAC 
CTTTGTAATG CAGAATTCTT AGTTGGTTTA GAAAGTAGTG AATATCATTT ACTTAATGAA 
ATTGAACACT ATCTCTGTTT TCCAAAATGG GAGTTATTTC TAGGTCGAAA AGCTTGTCCA 
CCTAGCAAAC CTATTTTTGT TGATTTATTA ACCAATTCTT TAGAGGATGC TCTTTATCAG 
TATGCAATAA GTCATCTAAA GAAGGGTACA TATCGCTTAC TTATTGAGTC CAAAGAACCA 
ACGGGAGCAT TACGTCTAGA TGTTCCAATT GACTTTAAAA AACGGATATT TTCTGCCCGA 
ACTGTCATTA CGCCTAAACC ATTGGAGGTA TCTGATGTAT CTGAGTAA 

 

Protein sequence

MMKTLLLRLA GPLQSWGRGS RFDFRDTDTI PTKSGVIGLV AAAMGINRDN QVELAKLAQL 
RMGVCVEKEG KLVVDYHTVI GTIHADGKPH KAPIQSYRQY LCNAEFLVGL ESSEYHLLNE 
IEHYLCFPKW ELFLGRKACP PSKPIFVDLL TNSLEDALYQ YAISHLKKGT YRLLIESKEP 
TGALRLDVPI DFKKRIFSAR TVITPKPLEV SDVSE