| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2441 |
|---|
| Symbol | |
|---|
| ID | 7110752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2722127 |
|---|
| End bp | 2723569 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643480697 |
|---|
| Product | CRISPR-associated protein, Cse4 family |
|---|
| Protein accession | YP_002377729 |
|---|
| Protein GI | 218439400 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATT TTCTAGAAAT TCATTTGCTT CAATCTACGC CGCCCTCTAA CATGAACCGA
GATCAAAATG GTTCACCCAA GACAGCCCAT TTTGGCGGAG TGGAACGCTT ACGAGTCAGT
TCACAATCAT GGAAACACGC AGTTCGTCAA TATTACAAAA AGACTTTGCC TGATGATCAT
AAAACCTACC GTGATAAAGG TTGGCCAACT GAATTGGCAA AACGGCTCAA ACAAGAAAAA
TTCGATGAAG AACTTAACTT AAAAGATTCG GATTTTTCCG TTGTTTTACC CATTGCTTTT
ATGTTATTAA GTGCCATTGG AGCTAAACGA GATGACAAAA AAGAGGGGGA TATAGATACG
ATGCTATTTC TCGGTGAAGC AGAAGTTCGT GAAATTATTA ATTGTGCTAA AAAATATCAA
CAAATTTTAG TCAAAGTAGC TCAAAATCCC CCTAAAAAAG GAGGAGAACC AAAAAAAGGA
AAGGGCAAAG GGAAGGCAAA AGCATCTAGT GATGATGATA CATCCACACC TGAAGAGACA
GAGTCTACAA TCACAATTCT TGAGCTTCCG GGTGCTATCC AAGGAGATTT AAAAACTAGC
TATAAAGATA ATCCTTTGGC CAAAGTAGTC AATGAAGAAG AGTTCAACCA GTTGAAAAAA
CTCTGTAATG AGATTAAAGG GATTTTGTAC GATGAAAAGA ACAAGCGAAT TAAACCTGTT
CCGGGAGACG TTGCGCTTTT TGGCAGGATG TTAGCGTCTT TTTCTGATGC TAGTGTAGAT
GCTTCTGTCA GTGTTGCTCA TGCCATTTCA ACAAATTCTA TAAAGCGAGA ATTCGATTAT
TGGACAGCAG CCCGTGACTT TCAAAAAAAC AATAGTGATG AGAGTCAAGG GGCTGGACAT
ATTGGAGATC GTCCTTTTGC CAGTGGTGTA TTTTACCGCT ACAGTTGCTT GGATTCTAAT
CAACTTAGCG AAAATTTAGG GGAAATTTAT CAGGAGGATA TTCAGTATTT AGTTGAACAA
TATTTAGATG CGTTTCTTCA TAGTCGTCCC TCTGGCTATA GCCATCAATT TGGACACGAT
ACCCTTCCTT TTGCAGGAAT ATTTGTGATC CGTCAATCTC AACCTATTTC TTTAGTTAAT
GCTTTTGATA TTCCCATTAA AAAATATGAT TCATTTTGCC GTCAATCTTG GAATAAGTTA
GTTGATCATT GGAATGAAAT TCAGCAAGCT TACGGTAAGC GGCTTCCTGT AAAAGAAGTT
CATGTTTTTT CACTAGAAAG CTTTAAAGAT ATCAGTGAAT TAGTCAAAGC TGTTCCTAAT
AAAAATTCAA ATAGTGAGAA CACTATCGTT TGTTATCATC AGGATTTTAG TGAGGCAATA
GAAGAAACGG CTGAAGCATT AGTTAAATAT TTGAACCAGG AGGAAGGTCG GGATAAAAAA
TGA
|
|---|
| Protein sequence | MTNFLEIHLL QSTPPSNMNR DQNGSPKTAH FGGVERLRVS SQSWKHAVRQ YYKKTLPDDH
KTYRDKGWPT ELAKRLKQEK FDEELNLKDS DFSVVLPIAF MLLSAIGAKR DDKKEGDIDT
MLFLGEAEVR EIINCAKKYQ QILVKVAQNP PKKGGEPKKG KGKGKAKASS DDDTSTPEET
ESTITILELP GAIQGDLKTS YKDNPLAKVV NEEEFNQLKK LCNEIKGILY DEKNKRIKPV
PGDVALFGRM LASFSDASVD ASVSVAHAIS TNSIKREFDY WTAARDFQKN NSDESQGAGH
IGDRPFASGV FYRYSCLDSN QLSENLGEIY QEDIQYLVEQ YLDAFLHSRP SGYSHQFGHD
TLPFAGIFVI RQSQPISLVN AFDIPIKKYD SFCRQSWNKL VDHWNEIQQA YGKRLPVKEV
HVFSLESFKD ISELVKAVPN KNSNSENTIV CYHQDFSEAI EETAEALVKY LNQEEGRDKK
|
|---|
| |