| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2438 |
|---|
| Symbol | |
|---|
| ID | 7110749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2717261 |
|---|
| End bp | 2719987 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643480694 |
|---|
| Product | CRISPR-associated helicase Cas3 |
|---|
| Protein accession | YP_002377726 |
|---|
| Protein GI | 218439397 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1203] Predicted helicases |
|---|
| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATT CTCTTTTACT CTGGGCAAAA CTCGATAAAA AAAATAGTGA AATATATCAC
CCGCCTTTAT TTCATCTCAT AGATACTGCT ACAGTAACAA AAGCTCTATT AACCAAGGGA
TTATCTCCAT ATTTAGTTTC TAGGTTGTCT GAAAGCTTAG AGATTAACCA TGAAAGCTTG
TTACAATTTG CTCCTTTTCT AAGTGGGTCA CATGATCTTG GTAAAATTGC TCCTGATTTC
CAATTTCAGA ATGATCAAGG CAGCGAGATC GCCAAAAAGC TTATGGGAGA ATCTTCTTAT
TCCTTATGGC AAAAAAATAG AGAGCGTAAT AAAATTCTCC ACGGGACTAT TACAGCAGTT
ACGTTGCCAG AATATCTTGA AAATTTTGGC TTGGATTCTA TTATAGCTGA AGAGTTAGCA
GTTATTACGG GAGGACATCA CGGAATTTTT CCTCATCCTA ATGATATTAA AAATGCTAAA
TATAGCAAAT CAAATATAGG TAAAAAGCAT TGGATAAAAC TTCGTAAGGA AACGGTAGAT
GAACTGGTTA AATATACAAA AATCGAAAAG AAAGATTTTC CAACTAAATT GACACCTGCT
TCAAAAATTA TTCTTGCAGG GTTAATCACT TTATCAGATT GGATTGCTTC TAATCAAGCT
TGGTTTCGTC CCTGTTCAAA TAAACCTCTT GAAGAATATG TTAAGACAAT AGATGAAAAA
GTGGATAAAG CACTTAGAGA ATCTGGATGG ATAGGGTGGG AATCTCATGA TTCTACCTTA
CCATCAAAAA AACTGTTCAA TTACATTAAG GAGTTTGAAC CTCGTCATTT ACAAGAAGAA
ATTGAAAAAA AAATGCCAGA ATTACAAGAT AAACCATTTC TTCTTATCAT TGAAGGGCCT
ACCGGCGAAG GTAAAACTGA AGGATCAATA ATTGTTGCTG AGTGGTGTGG TGTTTCTGGT
GGAATTGCTA GGGGAGCTTA TTTTGCCCTA CCGACTCAAG CAACCAGTAA TGAACTTTAT
AAGCGAATTA GTCAATATTT AAGAAATCGC TATCCTTTGC AAAAAGTTCC CTTCCATTTA
GTTCATAGTA ATGCTCAACT TTCCGATACA TTTAGTGAAA CAATCATTTG TCGTCTAGAC
CAAGTTTATG ACGAGGATAA ACACCCTCCT GGTGTTATTG CTAATGAATG GTTTACTTAT
CGAAAACGAC CTCTTTTAAG TCCTTGGGGA ACAGGTACAA TTGATCAAGC ATTAATGGGA
ATTTTACGAA GTAAGCATAA TTTTGTCAGG TTGTTCGGAC TAGCAGGAAA AACCGTTATT
CTAGACGAAA TTCACGCTTA TGATGCTTAT ACTTCTACAT TAATTGAATG GTTATTGGAA
TGGTTGGCGG CTTTAGGTTC TCCTGTAGTA GCTATGTCAG CAACGCTTTC TCAAAAACAA
CGTGAGACTT TTGTGGCAGC ATACAGTCGT GGATTTGGAG AATCAGCACC TATCCTCAAT
CAATGTCCTT ACCCCAGATT AACCATTTGT AGTCCAAAAA TAGAGCAAAA CAAAGTTATT
TCGTTTAATA TCAGCAAACT GAATGCTAGT CGTAAAATTC GTTTTGAATG GATTGACGAA
GCACAAATAC CTCAAATACT TGAAAATAGC TTAAAACAAG GGGGAACGGC AGCAATATTA
AGAACACAGA TTGCTTGGGC ACAACAAACA TATCAAGACT TAATCCCATC TACTTTTTCT
AAAGATGAAC GGATTTTATT ACACAGTCGT TTTTTACACA TAGACCGCAA ACAACAAGAA
AAGCGATGTT TAGCTGTTTA CGGCAAAGAG GTCGATAAAA CAAAGGTTCG ACCTCGTTCC
GCTTGCGCTG CAACTCAAAT TATTGAGCAA AGTCTTGATT TAGATTTTGA TTTAATGATT
TCTGACCTTG CCCCAATAGA TTTACTTCTT CAAAGAATTG GGCGCATTTG GCGGCATGAT
CGAGTCAGAC CAACAGGTAT AACAGAACCT CTTTTGTACC TGATTCGTCC AAAGTTTAAA
GATGATTTGC CAGATTTTGA TTTTATTGTT GAAAAATTTA TCTATGAACG CCACTTACTG
CTGAGAACTT GGGATGTTTT AAATTCTCTG GATGGTTATC TTGAACCCTT TAAATTTATT
GACTCAAAAA CACGACAAAT TGATTATTTA ATTGAGCAAG TTTACGACTT CTCCCACCCT
CCTTTAGCTT CTCTCAATTC CGCCACCCAA GATGATTGGA ATTCCAGTCA AGCCAAGCTA
GAGTCTCAAA TAATTTCTGA ACAACGATTA GCCAGAAATC GTAATTTACC CCATGTCAAT
CAACAGCCAG AAGCCTGGGA ACTGACCCAT CGTCCAGAAA ATGCAGACTT GGTAACTCGC
TTAACGCCTC GAACTGTGAC TGTGGTTTTA GCACAAGAAA CGGCAAGGGG TCTAATCCTT
CCCAGAAGTA GAAGTAAGCG TCAGATTCAT CCTAATCGTA AACCGACAAA AGAAGAAGTT
AAGGATATTC TTGACCATTC TGTGAACTTA ACTAAGCGAG GTTTGGTAGA CCAATTAGAA
GCATTACCAA CGGAATCAGG GTGGATACAA AATACCCTAT TACGAAACGT TAAATTACTA
CGTTTACAAA ATGGTTATTA CTCAGAAATT CCCAATTGGC AAATTTCTCT TAATGACGAA
TTGGGAGTTA TTACCACTCA GATTTAA
|
|---|
| Protein sequence | MMDSLLLWAK LDKKNSEIYH PPLFHLIDTA TVTKALLTKG LSPYLVSRLS ESLEINHESL
LQFAPFLSGS HDLGKIAPDF QFQNDQGSEI AKKLMGESSY SLWQKNRERN KILHGTITAV
TLPEYLENFG LDSIIAEELA VITGGHHGIF PHPNDIKNAK YSKSNIGKKH WIKLRKETVD
ELVKYTKIEK KDFPTKLTPA SKIILAGLIT LSDWIASNQA WFRPCSNKPL EEYVKTIDEK
VDKALRESGW IGWESHDSTL PSKKLFNYIK EFEPRHLQEE IEKKMPELQD KPFLLIIEGP
TGEGKTEGSI IVAEWCGVSG GIARGAYFAL PTQATSNELY KRISQYLRNR YPLQKVPFHL
VHSNAQLSDT FSETIICRLD QVYDEDKHPP GVIANEWFTY RKRPLLSPWG TGTIDQALMG
ILRSKHNFVR LFGLAGKTVI LDEIHAYDAY TSTLIEWLLE WLAALGSPVV AMSATLSQKQ
RETFVAAYSR GFGESAPILN QCPYPRLTIC SPKIEQNKVI SFNISKLNAS RKIRFEWIDE
AQIPQILENS LKQGGTAAIL RTQIAWAQQT YQDLIPSTFS KDERILLHSR FLHIDRKQQE
KRCLAVYGKE VDKTKVRPRS ACAATQIIEQ SLDLDFDLMI SDLAPIDLLL QRIGRIWRHD
RVRPTGITEP LLYLIRPKFK DDLPDFDFIV EKFIYERHLL LRTWDVLNSL DGYLEPFKFI
DSKTRQIDYL IEQVYDFSHP PLASLNSATQ DDWNSSQAKL ESQIISEQRL ARNRNLPHVN
QQPEAWELTH RPENADLVTR LTPRTVTVVL AQETARGLIL PRSRSKRQIH PNRKPTKEEV
KDILDHSVNL TKRGLVDQLE ALPTESGWIQ NTLLRNVKLL RLQNGYYSEI PNWQISLNDE
LGVITTQI
|
|---|
| |