Gene PCC7424_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2282 
Symbol 
ID7111350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2550557 
End bp2551678 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content46% 
IMG OID643480540 
ProductNHL repeat containing protein 
Protein accessionYP_002377572 
Protein GI218439243 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.11837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG CTAAACACTT ATCTATTGCT GTCGCTACCT CTGGATTTAT GGTTTTGGGA 
ACAGCCGCCG AAACTTTAGC CGTCACTTTG AGCTTTCATA GTCAAATTGG TGAACCCGGT
TTTGGGCCTG GACAGTTATT TGTTCCTCAA GGAATAGGGG TACAAGACTC AACCGGTAAT
ATATTTGTGA GTAATGGTCG GGGACTTAAC CCAGATGGCT CTTTTAACCC CAATCTTGGC
AACCGAGTCG AGATATTTAA TCCTCAAGGG AACTATCTAG GATCAATTGG TACGGGGAGT
CAAGAACCCG GAGATGGATT TGACGAACCC GCCGACCTCA AATTCGATCC GGCAACCGGT
GAGTTGCACG TTGGGGACGT TTTCAATAGC GAAATTGATG TTTATAATCC TAATACCGGT
GAATATATTA GATCTTATGG GTCTTTTGGT GGGCCAGTAG AAGGAAGAAT TTTCTTCGGG
CCGGGTGGGA TGTCCTTTGA TAACAAAGGC AATATCTACA TCACTGATTT TAGTGAGGAT
GTCATCAAGG TCTATGATGC CAGTAGCGGT GAGCTAACCA GAACGATTGG AAGTTCCGGC
ACTGCACCCG GACAGTTCCA GGGGCCAGCA GGGATTACCG TCTCCCCCAA TACCGGTAGA
ATTTATGTTA ACGATCAATA TAACTACCGG GTTCAAGTCC TAGCTCCAGA CGGAAACTTT
TTGTTTGCTT TTGGGGAACG AGGCAGCGAA CCGGGACAGT TAAGAGAAGG TATCGGGATC
GAAGTGGACG AATTTGAGAA TATTTATGTT GCTGATTCTC AAAATAGCCG AGTACAAGCT
TTTGATCGCA ACGGGAACTT TTTGACTAGC TTTGGTCAAC CGGCGGATGC ACCGCCTCCT
GCTTTAGGTG CGCCTCCTTT TGGCGATCCT CTTGACCTTA CCCCAGGTGT GTTTAACTGG
ACTGCGGGAC TCCATTACGA TGATAGCAAG CTCTATGTGG GGGATTTTTT CCAAGGCCGT
GTACAGGTGA TAGAAGCTGT TCCTGAACCG AACACGATAT TAGGTGTATT GCTGTTTGGA
GTCGGGACAA GATTCTTCCG GAAAATTTCT CAGGAAAAAT AG
 
Protein sequence
MKFAKHLSIA VATSGFMVLG TAAETLAVTL SFHSQIGEPG FGPGQLFVPQ GIGVQDSTGN 
IFVSNGRGLN PDGSFNPNLG NRVEIFNPQG NYLGSIGTGS QEPGDGFDEP ADLKFDPATG
ELHVGDVFNS EIDVYNPNTG EYIRSYGSFG GPVEGRIFFG PGGMSFDNKG NIYITDFSED
VIKVYDASSG ELTRTIGSSG TAPGQFQGPA GITVSPNTGR IYVNDQYNYR VQVLAPDGNF
LFAFGERGSE PGQLREGIGI EVDEFENIYV ADSQNSRVQA FDRNGNFLTS FGQPADAPPP
ALGAPPFGDP LDLTPGVFNW TAGLHYDDSK LYVGDFFQGR VQVIEAVPEP NTILGVLLFG
VGTRFFRKIS QEK