| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2238 |
|---|
| Symbol | |
|---|
| ID | 7109420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 2488809 |
|---|
| End bp | 2489804 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643480491 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002377528 |
|---|
| Protein GI | 218439199 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.473072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAGT TTCAGATCCA CTCAGACAGC GAAATACCGG CCTCTAAACA ACTATTTGAC
CAAATTCGTT TTGCGATCGC CTCTCGCCAA TATCCTCCCG GCCATCGCTT ACCCAGTACC
CGACAATTGG CGATGATTAC GGGTTTACAT CGAAACACGA TTAGTAAAGT TTATCAGCAA
TTAGAAGAAG ATGGTTTGGT AGAATCTTTA GCCGGGTCTG GGATTTATGT TAAGATTCAA
GGCTATGAAG GAGGAACTCA TCTACAATCC CCTATCCTTC AGCAGTATCC TCAAGCGAGT
CAATTAATTC GCAAAAGTTT AGATGATTTA CTCTCCCAAG GGTTAACCCT TTCTCAAGTC
AGAGAATTAT TTTTGAATGA AATTGATTGG CGGTTGCGCT GTAATGCTAA AGTTTGGATC
ACTGTGCCCA TTGCCGACTT AGGAGCGGGT AAATTAATGC TCAAAGAACT TGAACAGGCT
TTGGCGATTC CTGTTGAATT AGTGCCGCTT GAAGATTTGC CCCAAATTTT AGCACAAGCT
AAGTCAGGGA CAGTGGTTAC CAGTCGCTAT TTTATTACTC CTGCTGAAGC GATCGCAACT
CCCTATGGCA TTCGAGTCAT TCCTGTTGAC ATTTATGATT ACAGCAAAGA ATTAGACATG
ATTAAACGAC TGCCTCAAGA TAGTCGTTTA GGGATAGTCA GTCTCAGTGA TGGAATTTTA
AGAGTCGCTC AAATCCTCAT TCATAGTTTA CGGGGAGAAG ATTTATTAGT CATGAGCGCC
CAAGTGAGTG AAACGGATAA ACTGATGGCG ATCGTGCGGA CTACTCAAAC TATTATCACC
GATAAAGACA GTTATCCCAT GATTCAACGC GCCATCGAGT CTGCTAGAGA GGATTTAATT
CGACTGCCAG AAATTATTTG TACTGACAAT TATATTGGCG AAAAATCGAT TAATTTCCTC
CGCAAGGAAC TTGGCCTAGG GATAGAAGAG ACTTAA
|
|---|
| Protein sequence | MIQFQIHSDS EIPASKQLFD QIRFAIASRQ YPPGHRLPST RQLAMITGLH RNTISKVYQQ
LEEDGLVESL AGSGIYVKIQ GYEGGTHLQS PILQQYPQAS QLIRKSLDDL LSQGLTLSQV
RELFLNEIDW RLRCNAKVWI TVPIADLGAG KLMLKELEQA LAIPVELVPL EDLPQILAQA
KSGTVVTSRY FITPAEAIAT PYGIRVIPVD IYDYSKELDM IKRLPQDSRL GIVSLSDGIL
RVAQILIHSL RGEDLLVMSA QVSETDKLMA IVRTTQTIIT DKDSYPMIQR AIESAREDLI
RLPEIICTDN YIGEKSINFL RKELGLGIEE T
|
|---|
| |