Gene PCC7424_2236 details

Gene Information

• Locus tag: PCC7424_2236
• ID: 7109418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 2487333
• End bp: 2488013
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643480489
• Product: NC domain protein
• Protein accession: YP_002377526
• Protein GI: 218439197
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.404744
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACAG GGGATCAAAT TTACGTATAT CGAGAATTAC TCAATTTGCA AGGGCTTTAT 
GAACATCATG GGATTGACTG TGGGGATGGG ACAGTCATTC ATTATCGTAA ACCTAGCGAA 
ATGATTGAGC GCACTTCTTT AGACATTTTT ACCAGAGGAA ATCCCACTTA TATTAAAGAA 
TATCCTCAAG GATTTTCTTT TATTCCTGAA ATTGTTGTCC AACGAGCAGA AAGTCGATTA 
GGGGAGCAAA AATATAATCT TTTATTTAAT AATTGTGAGC ATTTTGCGAC TTGGTGTAAA 
ACGGGAATTA ATGATAGTAA ACAAGTCAGA GATTTTGTTC CTATTATTAC TCAACTTCAA 
ACCTCTAATT TATATAATCC CTTAAAGGAA GCTCTTGGAC AAACCGATTC TAAGACAGCG 
AAACAGTTGT TAAATGAGGC TTTAGGGGAT ATTAAAGTGG CTTGGGATGA TATTCAACCT 
CAGTATAAAT CAATGGTAAA AGAGGTAGAA ACCTGGGATA AAGTCGCTAA AGAAGCAGTT 
AAACGGAATC GGGATGATTT GGCTAGAGTG GCATTACAAC GTAAATTAAA TTATAAACGA 
CGAGCCACCG AATTAGAAGA GCAACTGAAA CACTTAGCAA CAATGACAGA GGATGTTTTA 
ACGAATTTAC TCAATACTTA A 

 

Protein sequence

MATGDQIYVY RELLNLQGLY EHHGIDCGDG TVIHYRKPSE MIERTSLDIF TRGNPTYIKE 
YPQGFSFIPE IVVQRAESRL GEQKYNLLFN NCEHFATWCK TGINDSKQVR DFVPIITQLQ 
TSNLYNPLKE ALGQTDSKTA KQLLNEALGD IKVAWDDIQP QYKSMVKEVE TWDKVAKEAV 
KRNRDDLARV ALQRKLNYKR RATELEEQLK HLATMTEDVL TNLLNT