Gene PCC7424_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2218 
SymbolmnmA 
ID7109400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp2464792 
End bp2465841 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content42% 
IMG OID643480471 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002377508 
Protein GI218439179 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.005679 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCGTG TCGTCGTCGG CCTATCGGGT GGAGTTGACA GTTCTACCGC CGCCGCTAGC 
TTACATCATC AAGGATATGA CGTTGTGGGT CTTACTCTGT GGTTAATGAA GGGTAAAGGC 
CAATGTTGTA GTGAGGGAAT GGTAGATGCG GCCTTTATTT GTGAACAATT GGGAATTCCT 
CATCATATTG TTGATAGCCG GGACGTTTTT GAGAAAAATA TTATCGATTA TTTAGTATCG 
GGTTATGAAG TGGGAATTAC CCCGTTACCT TGTTCTCAAT GTAATCGGGC GGTTAAATTT 
GGCCCGATGT TAAATTATGC TCGTCAAGAG TTAGGAATTG ACCGCATTGC TACCGGTCAT 
TATGCCCGAA TTGGTTATGA TGAAGTGTCT GGGCGCTATC AATTATTACG GGCAGTCGAT 
CGCAATAAAG ATCAATCTTA TTTTTTATAT GATCTCACTC AAGACTTATT AGCGGCAACT 
CTTTTTCCGT TGGGGAATCA AACCAAGGAA GAAACAAGAC GAATTGCCCA TGAATTTGGC 
TTAAAAACAG CCGATAAACC AGAGAGCCAA GACCTATGTT TAATTGAAGC TCACGGTTCA 
ATGCAGGAGT TTTTAGATAA ATATATTAAG CAAAAAGAAG GAGATATTGT TGACCTTAAA 
GGGAAGGTCT TAGGGAAACA TAAAGGCATA CATCACTATA CCATTGGTCA ACGCAAAGGC 
TTAGGAGTTG CTGCTCCTGA ACCTCTTTAT GTAGTTAAAC TAGATCCGAT TATGAATCGG 
GTTATTGTGG GAAATCGTGC CGATGCTGGA CAAAGTGAAT GTAATGTTTC CAGAATGAAT 
TGGGTTTCTA TCCCTGATCC TTCTACCCCC ATTCAGACTG AAGCACAAGT CCGTTATCGG 
AGTTTTCCGG TTCGGGTTAA TGTGATTCCT TTGGGTGATA ATCGGATTAC ATTAGTGTTT 
GATGAACCCC AATTTGGAAT TACTCCAGGA CAAGCCGCCG TGCTGTATCA AGGAGATATT 
TTACTCGGTG GCGGGATTAT TGAAAAGTAG
 
Protein sequence
MNRVVVGLSG GVDSSTAAAS LHHQGYDVVG LTLWLMKGKG QCCSEGMVDA AFICEQLGIP 
HHIVDSRDVF EKNIIDYLVS GYEVGITPLP CSQCNRAVKF GPMLNYARQE LGIDRIATGH 
YARIGYDEVS GRYQLLRAVD RNKDQSYFLY DLTQDLLAAT LFPLGNQTKE ETRRIAHEFG 
LKTADKPESQ DLCLIEAHGS MQEFLDKYIK QKEGDIVDLK GKVLGKHKGI HHYTIGQRKG 
LGVAAPEPLY VVKLDPIMNR VIVGNRADAG QSECNVSRMN WVSIPDPSTP IQTEAQVRYR 
SFPVRVNVIP LGDNRITLVF DEPQFGITPG QAAVLYQGDI LLGGGIIEK