Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2144 |
Symbol | |
ID | 7108873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 2397125 |
End bp | 2397904 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643480401 |
Product | phage shock protein A, PspA |
Protein accession | YP_002377439 |
Protein GI | 218439110 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.865725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTAT TTGATCGTCT AAGCCGAGTA GTTCGAGCCA ACCTTAATGA TTTAGTGAGC AAGGCAGAAG ATCCAGAAAA AGTGCTGGAA CAAGCCGTTA TTGATATGCA GGAAGATTTG GTACAGTTAC GTCAAGCCGT AGCTCGTTCC ATTGCCGAAC AAAAAAGATC CGAACAACAA TATAATCAAA ACCAAACCGA AGCCAATAAA TGGGAACAAC GGGCTAAATT GGCTCTGTCT AAGGGAGATG AAGCCTTGGC GCGAGAAGCT TTAACCCGTA AAAAATCTTT TTCAGAAACA GCCGCCGTCT TAAAACAACA ATTAGAGCAG CAAAGCGCGA CAGTTGACCA ACTCAAACGG AATTTAGTAG CCTTAGAAAG TAAAATTTCT GAAGCTAAAA CCAAGAAAAA TATGCTCCAA GCTCGCTCTA AAGCCGCTAA AGCTAATGAA GACCTCCAAA AAACTTTGGG TAACATTGGC ACAAGTAGCG CGATGGGAGC TTTTGAACGC ATGGAACAAA AAGTTTTAGA AGCAGAAGCG AGATCTCAAG CGGTTGGAGA ATTAGCCGGT TCAGGACTAG AAGATCAATT CCGGATGCTA GAATCCGGCA GTGATGTCGA TGATGAATTA GCACTGCTCA AAGCTCAAGT TCAAGGCGGA GGAGCTTTAC CCGGTTCGAC AACAACCAAC GCTTTACCGG AATCAAAGTC TACTACCTCC TCTAATTCGG CTGTAGATGC AGAACTCGAA GATCTACGCC GTCAAATTGA TAATCTATAG
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Protein sequence | MGLFDRLSRV VRANLNDLVS KAEDPEKVLE QAVIDMQEDL VQLRQAVARS IAEQKRSEQQ YNQNQTEANK WEQRAKLALS KGDEALAREA LTRKKSFSET AAVLKQQLEQ QSATVDQLKR NLVALESKIS EAKTKKNMLQ ARSKAAKANE DLQKTLGNIG TSSAMGAFER MEQKVLEAEA RSQAVGELAG SGLEDQFRML ESGSDVDDEL ALLKAQVQGG GALPGSTTTN ALPESKSTTS SNSAVDAELE DLRRQIDNL
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