Gene PCC7424_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2144 
Symbol 
ID7108873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2397125 
End bp2397904 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content43% 
IMG OID643480401 
Productphage shock protein A, PspA 
Protein accessionYP_002377439 
Protein GI218439110 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.865725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAT TTGATCGTCT AAGCCGAGTA GTTCGAGCCA ACCTTAATGA TTTAGTGAGC 
AAGGCAGAAG ATCCAGAAAA AGTGCTGGAA CAAGCCGTTA TTGATATGCA GGAAGATTTG
GTACAGTTAC GTCAAGCCGT AGCTCGTTCC ATTGCCGAAC AAAAAAGATC CGAACAACAA
TATAATCAAA ACCAAACCGA AGCCAATAAA TGGGAACAAC GGGCTAAATT GGCTCTGTCT
AAGGGAGATG AAGCCTTGGC GCGAGAAGCT TTAACCCGTA AAAAATCTTT TTCAGAAACA
GCCGCCGTCT TAAAACAACA ATTAGAGCAG CAAAGCGCGA CAGTTGACCA ACTCAAACGG
AATTTAGTAG CCTTAGAAAG TAAAATTTCT GAAGCTAAAA CCAAGAAAAA TATGCTCCAA
GCTCGCTCTA AAGCCGCTAA AGCTAATGAA GACCTCCAAA AAACTTTGGG TAACATTGGC
ACAAGTAGCG CGATGGGAGC TTTTGAACGC ATGGAACAAA AAGTTTTAGA AGCAGAAGCG
AGATCTCAAG CGGTTGGAGA ATTAGCCGGT TCAGGACTAG AAGATCAATT CCGGATGCTA
GAATCCGGCA GTGATGTCGA TGATGAATTA GCACTGCTCA AAGCTCAAGT TCAAGGCGGA
GGAGCTTTAC CCGGTTCGAC AACAACCAAC GCTTTACCGG AATCAAAGTC TACTACCTCC
TCTAATTCGG CTGTAGATGC AGAACTCGAA GATCTACGCC GTCAAATTGA TAATCTATAG
 
Protein sequence
MGLFDRLSRV VRANLNDLVS KAEDPEKVLE QAVIDMQEDL VQLRQAVARS IAEQKRSEQQ 
YNQNQTEANK WEQRAKLALS KGDEALAREA LTRKKSFSET AAVLKQQLEQ QSATVDQLKR
NLVALESKIS EAKTKKNMLQ ARSKAAKANE DLQKTLGNIG TSSAMGAFER MEQKVLEAEA
RSQAVGELAG SGLEDQFRML ESGSDVDDEL ALLKAQVQGG GALPGSTTTN ALPESKSTTS
SNSAVDAELE DLRRQIDNL