Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2142 |
Symbol | |
ID | 7108871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 2395420 |
End bp | 2396586 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643480399 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_002377437 |
Protein GI | 218439108 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTG CCAAACGGTT AGAAACTCTC TCAACTAATG TCTTTGCTGA TATGGACAGG GCAAAAAACC ACGCCAGAGC CATAGGAAAA GAAATTATCG ACTTATCTTT AGGCTCTTCT GATTTACCCG CTAGTCCCCA TGTCATCAAT GCGATCGAGC AGTCTTTACA TGATGCCAAA ACTCATGGAT ATTTGTTATT TCATGGCACA AAGACGTTTC GAGAAGCAGT ACAAGAGTGG TATTCTAACC GTTTTGGGAT TACAGTTGAC CCGGAAACGG AAATTTTACC CCTAATTGGT TCTCAGGAAG GAACAGCCCA TTTACCTCTG GCGGTCTTAA ATCCGGGGGA TTTTGCCTTA CTTCTCGATC CCGGTTATCC TTCCCATTAT GGTGGGGTAC ATCTAGCCGG GGGGCAAATG TATACTATGC CTTTATTGGC AGAAAATGAT TTTTTACCAG TTTTTGAAGA GATTCCTACC CTAGTTTTAA AACAGGCGAA GATGATGGTT TTGAGTTATC CCCATAACCC GACTTCTGCC ATTGCTCCCT TAAGTTTTTT TCAAAAAGCG GTCTCTTTTT GTCGAGAACA TCAAATTGTT TTAGTTCACG ATTTCCCTTA TTGTGATATT TATTTCCAGG AAAATAACCC CCCGGCTTCA ATTTTTCAAG CTGATCCCCA GAAAGAAATC TCGATAGAAT TTTTTACGTT TTCTAAATCT TATAATATGG GAGGGTTTCG CATTGGGTTC GCCATCGGTA ATGCTCAATT AATAAGGGCA CTTAAACAGA TTAAAGCGGT GGTGGATTTT AATCAATATC GAGGGATTTT AAATGGGGCG ATCGCAGCTT TACAAGGTTC TCAAGAATCG GTGAAACAGA CGGTTGAAAC TTATAAAAAA CGTCGAGATG CCTTTATTAA TGCCCTACAT TCGATCGGTT GGCAAGTTCC CACCCCTAAA GCAACGATGT ATGTCTGGGC AAAATTACCT GAACCTTGGA CTCATAATTC GGTAGAGTTT TGTACTCAGT TAGTCGCCGC AACTGGGGTG GCTGTTTCTC CGGGTTCTGG GTTTGGTAAA TGTGGAGAGG GGTATGTTAG ATTTGCTTTG GTGCAAGACC CGGAGGTTTT AGAATTAGCT GTAGAAAAAA TAGCTTCTTT TATTTGA
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Protein sequence | MQLAKRLETL STNVFADMDR AKNHARAIGK EIIDLSLGSS DLPASPHVIN AIEQSLHDAK THGYLLFHGT KTFREAVQEW YSNRFGITVD PETEILPLIG SQEGTAHLPL AVLNPGDFAL LLDPGYPSHY GGVHLAGGQM YTMPLLAEND FLPVFEEIPT LVLKQAKMMV LSYPHNPTSA IAPLSFFQKA VSFCREHQIV LVHDFPYCDI YFQENNPPAS IFQADPQKEI SIEFFTFSKS YNMGGFRIGF AIGNAQLIRA LKQIKAVVDF NQYRGILNGA IAALQGSQES VKQTVETYKK RRDAFINALH SIGWQVPTPK ATMYVWAKLP EPWTHNSVEF CTQLVAATGV AVSPGSGFGK CGEGYVRFAL VQDPEVLELA VEKIASFI
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