Gene PCC7424_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2121 
Symbol 
ID7108850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp2373452 
End bp2374333 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID643480378 
ProductFe-S cluster assembly protein NifU 
Protein accessionYP_002377416 
Protein GI218439087 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR02000] Fe-S cluster assembly protein NifU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.141137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAAT ATACAGATAA GGTAATGGAA TTCTTCTACA ATCCCCGAAA CCAAGGGGTG 
ATTACAGAGA AGAAAGAAGG TGAAAAAGTT GTAACTGGAG AAGTAGGTAG TATAGCTTGT 
GGAGACGCGC TCCGGTTACA CTTAAAGGTT GATGAAGTCA CATCCGTTAT ATTAGATGCT 
CGTTTTCAAA CATTTGGTTG TGCTTCTGCG ATCGCTTCTT CTTCTGCCTT AACGGAATTA 
CTCAAAGGCA AAACTATAGA TGAGGCACTA AGGTTGACCA ATAGAGAGAT AGCCGAATAT 
CTAGGGGGTT TACCCGAAGA AAAAATGCAC TGTTCGGTAA TGGGACAGGA AGCATTAGAG 
GCAGCAATCT TTACCTATAA AGGCATTCCC TTAGAAAGCC ATGAAGATGA TGAAGGAACC 
TTGGTTTGTA AATGCTTTGG GATTACCGAT AGCCGAATTC GTCGCATCAT CATCGAGAAC 
GATCTTACCA CTGTGGAACA AGTCACAAAC TATGTTAAAG CAGGGGGTGG ATGCAGTTCT 
TGTCTACCAG CTATCGACGA TATTCTGGCA GAAGTTGCCC AAGAGAAGGC AAAGGCAGTG 
GAGGTGGCAA CAGAAGTTGT TACAGCATCC TCTGGTTTCG GGCAGTTGAC GAATCTGAAA 
AAAATCCAAC TGATTGAGCA AGTATTAGAA AAAGAGGTCA GACCCATACT CAAAGCAGAT 
GGGGGAAATG TAGAACTCTA TGACGTAGAA GGACACCGAA TTAAAGTCGT TCTTAAAGGA 
GCGTGTGGTT CATGTGCGGG AAGTACCGCA ACCCTAAAAC ACGCCATTGA AGACAAACTC 
AGAGAATTAA TTGATTCAAC CTTAGTCGTT GAAGCTGTTT AA
 
Protein sequence
MWEYTDKVME FFYNPRNQGV ITEKKEGEKV VTGEVGSIAC GDALRLHLKV DEVTSVILDA 
RFQTFGCASA IASSSALTEL LKGKTIDEAL RLTNREIAEY LGGLPEEKMH CSVMGQEALE 
AAIFTYKGIP LESHEDDEGT LVCKCFGITD SRIRRIIIEN DLTTVEQVTN YVKAGGGCSS 
CLPAIDDILA EVAQEKAKAV EVATEVVTAS SGFGQLTNLK KIQLIEQVLE KEVRPILKAD 
GGNVELYDVE GHRIKVVLKG ACGSCAGSTA TLKHAIEDKL RELIDSTLVV EAV