Gene PCC7424_2066 details

Gene Information

• Locus tag: PCC7424_2066
• Symbol: def
• ID: 7111845
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 2319225
• End bp: 2319788
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643480322
• Product: peptide deformylase
• Protein accession: YP_002377361
• Protein GI: 218439032
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 0.166948
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTTCTC TTGTCATTGT CGATAAACAA AAATTAGAAA ATCCTCCCCT AGAAATTCAT 
TATCTCGGCG ATCGCGTTCT GCGTCAGCCG GCTAAACGTA TTGCTAAAGT TGATGAGAGT 
GTGCGTCAAT TGGCGAAAGA AATGTTACAA ACCATGTATA GTTCTAATGG GATTGGTTTG 
GCCGCGCCTC AAGTTGCCGT AAATAAACAA TTGCTCGTCA TCGACTGTGA ACCGGATAAT 
CCCGCAAATC CTCCCTTAAT TCTCATCAAT CCGCAAATTA CCCAATCTAG CCAAGAATTA 
TGTCAATTTG AAGAGGGATG TCTCAGTATT CCTGGGGTTT ATCTCGATGT AGTTCGTCCT 
AAAGTCATTG AAGTGAGCTA TAAAGATGAA AGCGGACGAC CCAAAAAACT CAAAGCGACT 
GATTTATTAG CCCGTGTCAT TCAGCATGAA ATGGATCATC TCAATGGAAT TATGTTTGTG 
GATCGGGTCG GGAATAATTT AGCATTAACA ACAGAATTGA AAAAGCATGG GTTCAATGTG 
CAAGCTGTTA AACCCATTGC TTAA 

 

Protein sequence

MSSLVIVDKQ KLENPPLEIH YLGDRVLRQP AKRIAKVDES VRQLAKEMLQ TMYSSNGIGL 
AAPQVAVNKQ LLVIDCEPDN PANPPLILIN PQITQSSQEL CQFEEGCLSI PGVYLDVVRP 
KVIEVSYKDE SGRPKKLKAT DLLARVIQHE MDHLNGIMFV DRVGNNLALT TELKKHGFNV 
QAVKPIA