Gene PCC7424_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2016 
Symbol 
ID7109484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2272275 
End bp2273294 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID643480274 
ProductNmrA family protein 
Protein accessionYP_002377314 
Protein GI218438985 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.675517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAAA AATCCTCAAT GAAATTATTG ATAGTTGGTG CTACGGGCAC ATTAGGGATA 
CAGGTAGCTC GTCGCGCTCT CGATGAAGGC CATCAGGTGC GCTGTTTAGT GAGAAATCCC
AAGAAACCGG CCTCTTCTAA GTTAAAAGAA TGGGGAGCGG AACTTGTCCA AGGAAACCTG
TGTGATGCTA GAACCCTTCC TGCGGCTTTA GAAGGCGTTG AGGGGGTGAT CGATGTGGCT
ACGGCTAGAG CGACTGATTC ATTAAGTATT AAAGAGGTTG ACTGGGAAGG AAAAGTCAAT
CTCATTCAAG CGACTAAAGC GGCTGGGGTT AACCGTTATA TCTTTTTCTC AATTCACAAT
GCCGAGAAAT TTCCTAACGT TCCTTTAATG GAAATTAAGC ATTGTACGGA GCTTTTTTTA
GCTGAGTCTG GTTTGAATTA TACCATTTTG CGTCCTTGTG GGTTTATGCA GGGGCTAATT
AGTCAATATG CTGTGCCTAT TTTAGATCAG CAGGGGGTTT GGATTACGGG AGAGAGTACC
CCGATCGCTT ATATGGATAC CCAGGATGTA GCCCTTTTTG CAATTCGCGC CCTAGAAGTT
CCTCAAACTG AGAAAAAAAC CTTTCCGATC ATGGGAACTC GCTCCTGGAA AGCCGAAGAC
ATTATCCAAC TGTGTGAACG GCTTTCTGGA AAAGATGCTA AAATTTCCCG TGTTCCGTTA
GGGCTGTTAA GGTTTCTACG GAGTTTAACT CGTTTTTTCC AATGGACTTA TAATATATCC
GATCGTCTGG CTTTTGCGGA AGTTTTAGCT ACGGGTCAAC CTTTAGATGC GCCAATGGAT
GACGTTTATC AAACTTTTGG ACTTGATCCA AACCAAACAA CTACTTTAGA ATCCTATCTA
CAAGATTATT TTAGTCGAAT CCTCAAAAAG CTTAAAGAAC TGGATTACGA CAAAAAGAAA
GACCAAAAGA AAAGCAAAAA AACCCCTTTT AAAACTAATT TTGACGGATC TCTAAAGTAG
 
Protein sequence
MLQKSSMKLL IVGATGTLGI QVARRALDEG HQVRCLVRNP KKPASSKLKE WGAELVQGNL 
CDARTLPAAL EGVEGVIDVA TARATDSLSI KEVDWEGKVN LIQATKAAGV NRYIFFSIHN
AEKFPNVPLM EIKHCTELFL AESGLNYTIL RPCGFMQGLI SQYAVPILDQ QGVWITGEST
PIAYMDTQDV ALFAIRALEV PQTEKKTFPI MGTRSWKAED IIQLCERLSG KDAKISRVPL
GLLRFLRSLT RFFQWTYNIS DRLAFAEVLA TGQPLDAPMD DVYQTFGLDP NQTTTLESYL
QDYFSRILKK LKELDYDKKK DQKKSKKTPF KTNFDGSLK