| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1998 |
|---|
| Symbol | |
|---|
| ID | 7109466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2252719 |
|---|
| End bp | 2255172 |
|---|
| Gene Length | 2454 bp |
|---|
| Protein Length | 817 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643480256 |
|---|
| Product | Hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_002377296 |
|---|
| Protein GI | 218438967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.0671214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAT TTACAGTTAC CAATTTACTT GATAATGGAG AAGGAAGTCT CCGACAAGCC
ATTGCTAATG CTAACAGTTT AGACGGAGCC GATACCATTG AGTTTGCTAG TAATCTCAGT
GGCGGAACTA TCAGTTTAAC TAGCGGAGAA TTATCTATTA CTGATTCTTT AACGCTTGAG
GGTTTGGGAT CAGATTTGTT GACCATTAGC GGCAGCGATC TTAGCCGTAT CTTTAATATT
AATGATCAAA CAGAATATTA CTCTTATAAC TCTAATATTC TCGATGTGGT AATTTCAGGA
TTAACCCTGA CCAATGGCTT TGTCTCAGAA AATACACAAA GTTTTAATGC TCCCGCAGCC
AGTGGTGGAG CTATTTACAA TTATGATGAG AATTTAACGC TCATTGATAC AGTTATAACC
GGCAACACAG CAGCCGGAGA TCCCTTTGCT TATTATGAAA ACGCAGAGGC TCTAGGTGGA
GGCATCTTCA ATTATTCCGG AACCGTGACA GTCATTGATA GTGTTATCAG TAGCAACACA
GCACAAGGCG GTACTGTTTT GCTTGATTTT ATTAGGGAAG GTGGATTTGT CGGCTCTGGT
GGAGGAATAT ATAGCAGAAC CGGCAACGTG ACGGTGATTA ACAGCACGAT TAGCGACAAT
ACAGCAAAAA CAGGTAGAGG AGGGGATTTT GTTTTTACCT ATGAGAGTCA TGGTGGGGGT
ATTGCTGGCG GTTTCAACAG CACCATAACC ATAACTAACA GCACTATCAG TAACAATACA
GTAGTCGGTG CAAATACTAC AAATATCTAC TCTAGGGAGG GAGGTGACGC TAGGGGTGGT
GGTATCTCCG GAGATAACGT TATAGTAAAC AACAGTAGTA TTACCGGCAA TACAGTCCTA
GGGGGTAACG GGACTGGAAG TTTTTATGTA TACTATGGTT ACAGTGGCGG TTACGGTGGC
GATGCCCGTG GTGGTGGCAT CTCAGGAAAT AATGTAACCG TGAGCAACAG CACCATCAGT
GGTAACATAG CACAAGGAGG CAATGGGGGT ATAGGCGGAA AGGCCAATGT CTTCCGAGGT
TTTTTCTATG GTACAAACGG GGGTCGAGGT GGTAATGCAA CTGGGGGGGG GATCTCAAGT
GCTAACCTGA CCATGAGCAA CAGCACCATT AGTGGAAACA CAGCCCAAGG AGGCAACGGT
GCTAATGGGG GTCAAGGGGC TGACACTGCC ACTATCAATG AATATTTTGG CTACTCCGGA
TACTACTACT ACTTTGCTGG CAACGGAGGT AACGGGGGCA ACGGGGGCAA TAGTGTTGGT
GGAGGCGTAG CGGTCTCCAA TAATGCCCTG ATCGCCAATA GCACCATTAC CAATAATACA
CTAGACTCTG GTACTGGCGG GGTCGGTGGT AGTGGCGGTT TGGGGAACGA GAGTCTGAAT
ATCCCCAACG GTATTGATGG AACAGATGGG ACTATAGGAA ATGAGATTGG TGGGGGACTT
TCGGCGAACG GGACTGTTAC CAGCACGATC ATTGCCGGCA ATACTGATAA TCAAGATCTC
GCCGGAACGT TTACTTCTGG CGGAAATAAC TTAATTGGGA ATGGTGATGG GGCAACCGGT
TTCATTGATG GAGTCAATGA CGATCAAGTT GGGACGACAA TTAACCCCAT TGACCCTCTG
TTAAGTCCCC TACAAGATAA CGGTGGCTTA ACTTTGACTC ATACTCTCCT GCCGGGTAGT
CCGGCCATTG ATGCAGGGAG TAATCCTTCC ACCCTAATCA GTGACCAACG AGGAGCGCCG
AGGGTTGCGG GAGATGGGGC AGATATTGGA GCGCTTGAGC TAGCTGATGA AACTTTATTA
GGGGATCAAA GCTCAAATAG CTTCACAAGT GGAACGGGTA ACGATTTCTT AGAGGGTGGA
GACGGAAATG ATGCCCTCAA TGGGAGTAGC GGAAATGATG GGTTAAGAGG AGGAGCCGGC
AGCGATCGCT TAATTGGTTC AGACGGGAAT GATCTTCTCA TTGGCGGACT TGATCGAGAC
ATTCTTGCAG GAGGTGAAGG GGCGGATGTG TTCCGCTTTG AGTCTTTAGC TGATTCAAGC
TTGCTGAGTC CAGACCGGAT CAGGGATTTC AACCAAACCG AGGGAGACCG ATTTCAATTG
CTCCCTACTA ATCCAAGTAC CTTATGGAAT GCAGGGGACG TTACAGGAGA TAATCTGAGG
GTTGCCCTTG AAGCGGCTTA TGCCGATAGC AATCAAAGTG CAGGGGGGAG TCAACCCTTG
GGACTCAATG AAGCAGTCTT GTTTAATTTT GGCTCTCGAA GTTATTTATC GATCAACAAC
ACCATAAGCG GATTTAATCC CGAACAGGAT TTAGTCGTAG AAGTATCCGG AATTGTCTTA
GCTTCGGGAG ATGAAAATGC CGGAGTTTTG AGTGTAAGTG ACTATTTTGT CTAA
|
|---|
| Protein sequence | MAVFTVTNLL DNGEGSLRQA IANANSLDGA DTIEFASNLS GGTISLTSGE LSITDSLTLE
GLGSDLLTIS GSDLSRIFNI NDQTEYYSYN SNILDVVISG LTLTNGFVSE NTQSFNAPAA
SGGAIYNYDE NLTLIDTVIT GNTAAGDPFA YYENAEALGG GIFNYSGTVT VIDSVISSNT
AQGGTVLLDF IREGGFVGSG GGIYSRTGNV TVINSTISDN TAKTGRGGDF VFTYESHGGG
IAGGFNSTIT ITNSTISNNT VVGANTTNIY SREGGDARGG GISGDNVIVN NSSITGNTVL
GGNGTGSFYV YYGYSGGYGG DARGGGISGN NVTVSNSTIS GNIAQGGNGG IGGKANVFRG
FFYGTNGGRG GNATGGGISS ANLTMSNSTI SGNTAQGGNG ANGGQGADTA TINEYFGYSG
YYYYFAGNGG NGGNGGNSVG GGVAVSNNAL IANSTITNNT LDSGTGGVGG SGGLGNESLN
IPNGIDGTDG TIGNEIGGGL SANGTVTSTI IAGNTDNQDL AGTFTSGGNN LIGNGDGATG
FIDGVNDDQV GTTINPIDPL LSPLQDNGGL TLTHTLLPGS PAIDAGSNPS TLISDQRGAP
RVAGDGADIG ALELADETLL GDQSSNSFTS GTGNDFLEGG DGNDALNGSS GNDGLRGGAG
SDRLIGSDGN DLLIGGLDRD ILAGGEGADV FRFESLADSS LLSPDRIRDF NQTEGDRFQL
LPTNPSTLWN AGDVTGDNLR VALEAAYADS NQSAGGSQPL GLNEAVLFNF GSRSYLSINN
TISGFNPEQD LVVEVSGIVL ASGDENAGVL SVSDYFV
|
|---|
| |