Gene PCC7424_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1984 
Symbol 
ID7109452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2237272 
End bp2238225 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content40% 
IMG OID643480242 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002377282 
Protein GI218438953 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.764783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CTATTGTGAC TGGCGTTGCT GGTTTTATTG GTTCTCATCT AGCACAAGCC 
TTATTAAAGC AGGGAGAAAG GGTAATTGGC ATTGATCAGA TCAATGATTA TTATGATCCC
CAGTTCAAAC GTCAAAATCT CCAAACTTTA ACTCATGATC CTAATTTTGA ACTGATTGAG
GCAGATATTC AAGGTTTAGA TTGGCAAAAG TTATTAATCG ATGTGGATGT TATCTATCAT
CAAGCGGCAC AAGCAGGAGT CCGGGCGAGT TGGGGGGAGA GTTTTCGCCT TTATACCGAA
CGGAATATTA ATGCTACACA AATTATTTTA GAAGCGACTA AAGAGGCTAA ATCTTTAAAA
CGGTTAGTGG TTGCTTCTAC CTCTTCGGTG TATGGGAATG CGGAAACTTT ACCTACCCCG
GAAACCATTT GTCCTCAACC GGTTTCTCCT TATGGCATTA CTAAATTAGC CGCCGAGCGC
TTATGCTGGT TATATCATCA AAATTTTGGG GTTCCGGTTA CCGCTTTACG TTATTTTACG
GTTTATGGCC CTCGTCAACG TCCGGATATG GCTTTTCATA AGTTTTTTAA AGCTGCGATC
GCCGATGAAG GGATTTCTAT TTATGGAGAT GGACAGCAAA CGAGAGATTT TACTTTTGTC
AGTGATATAA TTGGGGCTAA TTTAGCAGCA GCGACTATTA AAGAAGCCGT TGGAGAAGTA
TTTAATATTG GCGGAGGAAG TCGAGTCGTT TTAGCGGATA TTTTAGATAA AATGGAAACG
ATTATCGGTC GTCCTCTTCG ACGAGAATAT ATTGAAAAAG CAAGGGGAGA TGCACGACAT
ACCGGCGCAG ATATTACAAA AGCTCAAAAA ATTTTAGGGT ATTATCCCCA AGTTTCTTTA
ACTGAAGGGT TAACTCAAGA ATGGGAATGG ATTCAAAAAA TTTATTGTCA TTAG
 
Protein sequence
MSISIVTGVA GFIGSHLAQA LLKQGERVIG IDQINDYYDP QFKRQNLQTL THDPNFELIE 
ADIQGLDWQK LLIDVDVIYH QAAQAGVRAS WGESFRLYTE RNINATQIIL EATKEAKSLK
RLVVASTSSV YGNAETLPTP ETICPQPVSP YGITKLAAER LCWLYHQNFG VPVTALRYFT
VYGPRQRPDM AFHKFFKAAI ADEGISIYGD GQQTRDFTFV SDIIGANLAA ATIKEAVGEV
FNIGGGSRVV LADILDKMET IIGRPLRREY IEKARGDARH TGADITKAQK ILGYYPQVSL
TEGLTQEWEW IQKIYCH