Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1978 |
Symbol | |
ID | 7109446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2229264 |
End bp | 2229953 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643480236 |
Product | polysaccharide deacetylase |
Protein accession | YP_002377276 |
Protein GI | 218438947 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.68058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTGG CTCCGGTTTA TCCACTGCTG TATCGCGTTC TCCATCCTCT GTTTCCTAAG TGTCTTTGGC ATGGCGCAAC AGAGCAAAAA ACCATCGCCT TAACCTTCGA TGATGGGCCT CATCCTCAAT ACACCCCTAA ATTATTGGCG GTTTTAGACC GCTATCAAAT CGAGGCCAGT TTTTTTTGGT TAGGCGTTTG TGTTCAAAGA AACCCAGAGC TTGCCAACGA AGTCTTTCAA AGAGGTCATG GGATCGGATT ACATGGCTAT ACTCATCAAT CCTTTCCTCG ATTAAGTACA GATGAATTAA AACAAAGTCT CTTGAACACT CAAAATGCGA TCGCCGACGC TTGTCAAATT GATGGACACC TAATTCGGGA TGTTCGACCC CCCAATGGGT TATTTATGCC CCGACAATTA CGACAATTAG ACCAATGGGG TTATCGGGTG GTGATGTGGA CAGTCGTTCC GGAAGACTGG GTTTGTCCAG GAATTTCTGT GGTTGAAGAG CGAACCTTAG CTCAAGTTAA TTCAGGAGCA ATCATTGTTT TACATGATGG TTATTATGGA GGAAAGGATG TCGCTGCTAT CACCGCTAAT TTGATTCCTC AACTGCTAGA CCAAGGATAT CAATTTGTAA GTGTCAATGA GTTTTGGCAA CAAAGACAAT TAACAAAACC CAGAAACTGA
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Protein sequence | MQLAPVYPLL YRVLHPLFPK CLWHGATEQK TIALTFDDGP HPQYTPKLLA VLDRYQIEAS FFWLGVCVQR NPELANEVFQ RGHGIGLHGY THQSFPRLST DELKQSLLNT QNAIADACQI DGHLIRDVRP PNGLFMPRQL RQLDQWGYRV VMWTVVPEDW VCPGISVVEE RTLAQVNSGA IIVLHDGYYG GKDVAAITAN LIPQLLDQGY QFVSVNEFWQ QRQLTKPRN
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