Gene PCC7424_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1945 
Symbol 
ID7109946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2176807 
End bp2177706 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content36% 
IMG OID643480204 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_002377244 
Protein GI218438915 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.597579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAT TAAATTTGCT TATGATCAGT AACAATTGGG AAGAAAATGG GTTTATTGGG 
CCGATTAAGG CATTAACAGA GAAAGAAATA TTACCCATTA CAAATGAAGT TAGAAATATT
ATCTCGAATA GTAAAGATTT TTTGCAATTA AGAAATAAGC ATCTGTATTC TAAACTCATC
CAAGAATTAT GCTTAAATGA GATAATAATT AATGCGGTGA AAGACTTGAT GGGTTCTAAT
TTAATTCTCT GGCGTACCCA AATTTTTAAG GTTAACAAAA ACCAGGGGTT TGGCTGGCAT
CAAGATCAAT ATCGAACATT GCTTTCTGAG CCTACTAAGC ACATTTCTCT TCAAATTGCA
CTTACTAAGT CAACGGAAGA TAATTGTGTA TTCTTTATTC CTGGAAGTCA TAAAATGAAT
TCTTCAGAGC TTAACGAAGC GGGTTTGTAT CTAGAAGAGA ATTGTCAACT AAATATCCCT
CAATATTACC GTAGCTTTAA GAGTTCTATT AAACCCGTAA AGATGATCTT GGAGCCTGGG
GAGTTTTTTA TCTTTCATCC TTCTACTTTA CACGCATCTT TTGATCGGAG GAAGGAACAT
TGTAAAGCAC CCAAGACAGT AAATCAAGGA AGCTTCTTGC CAGTTGGTAG GCTATGGAAT
CGTACAGTAG GGGTTTTCAA TTCCCTAAAT TTTCAGAGTA GTCCACGTCT AGGGGTGGCG
ATGAGGATAA CTGTTCCAGA AGTCAAAGTT TTACCTACTG CTTTTGAGAA AACTTTGCCA
CGTATTGATA AATGTGTTCT TTTGCATGGA TCGAATGAAA ATGGAGTCAA TGAATTAGAT
AGTTGGTCTG TTAACGATAA AACAAGGGTT AATGAACAGA GCCTCATAGA AGTTGGCTAA
 
Protein sequence
MYQLNLLMIS NNWEENGFIG PIKALTEKEI LPITNEVRNI ISNSKDFLQL RNKHLYSKLI 
QELCLNEIII NAVKDLMGSN LILWRTQIFK VNKNQGFGWH QDQYRTLLSE PTKHISLQIA
LTKSTEDNCV FFIPGSHKMN SSELNEAGLY LEENCQLNIP QYYRSFKSSI KPVKMILEPG
EFFIFHPSTL HASFDRRKEH CKAPKTVNQG SFLPVGRLWN RTVGVFNSLN FQSSPRLGVA
MRITVPEVKV LPTAFEKTLP RIDKCVLLHG SNENGVNELD SWSVNDKTRV NEQSLIEVG