| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1911 |
|---|
| Symbol | |
|---|
| ID | 7109912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 2141792 |
|---|
| End bp | 2143051 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643480171 |
|---|
| Product | GtrA family protein |
|---|
| Protein accession | YP_002377211 |
|---|
| Protein GI | 218438882 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0238992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACC CAATTTTAAA AAATCTCTTA AAAACACCTT CAGGTTCTTT ACAAATTCCC
CTCAATCCCA ATGGGGAAAT AAATGGAGCA GATCAAGATA ATAAAACCTC GAAACCTGTT
CAATTTTCTT TAATCATTCC TACTTATAAC GAGAGGGGCA ATATTAATTA TATTATCGAG
TCATTAACTC GTCTCCTTGA CCCCTTTTTA CCCAATGATT ATGAATTAAT TATTGTCGAT
GATAACAGTC CCGATCACAC TTGGGAAATT GCCGAGTCTC TCACCCTTAC CTATCCTCAA
TTGCGAGTCA TGCACCGCAC AGAAGAAAAA GGACTGTCTT CGGCAGTTAT TCGGGGATGG
CAAGTGGCAA GGGGAGAAAT TTTAGGAGTC ATAGACGCAG ATCTTCAACA TCCCCCAGAA
ATTTTATTAA AGTTATTAAA TTGTATCCAA CAAGGCGCAG ATTTAGCGGT AGCGAGTCGT
CATGTTGATG GGGGTGGAGT GAGTGAATGG AGTCTTATTA GACGATTTTT ATCGAGAGGG
GCGCAACTTT TAGGGTTAAT TATTCTTCCT TCGGTTGTGG GGCGAGTTTC TGATCCTATG
AGTGGCTATT TTATGGTACG TCGTCGCGCT ATTGCTGGCC CTATTTTAAA CCCTTTGGGC
TATAAAATTC TTTTGGAAGT TATTGGACGA GGAAATATTG AAACAATTGC TGAAGTGGGT
TATGTTTTTC AAGAAAGACA AGAAGGGGAA AGCAAAGTTA CCTGGAAGCA ATATATAGAA
TATATCTTAC ATTTAATCCG CCTACGTTCT CGCGGAAGAA TAGCAAGACT CAGACAACAG
TTTAACTTTC CTGTGGGTCG ATTTATTCGC TTTGGTTTGG TAGGATTAAG CGGTGTATTT
GTGGATATGA CCCTGCTTTA TTTACTCAGC GATTCAACTA CGTTAGGATG GGAACTAACT
CGCAGTAAAA TTATCGCGGC TGAAGTGGCA ATTATTAATA ATTTTCTCTG GAACGATCGC
TGGACTTTTG GGGATCTTTC CAGTCAACAA AGGGGATGGA ATCAACGGTT AAAACGTTTT
CTTAAGTTTA ATATGATTTG TTTAGCGGGT TTAGTCTTAA ATGTTTTACT GTTAAATCTG
TTCTTTAATA TCTTTGGAAT TAACCGTTAT GTAGCGAATT TAATAGCGAT CGCTCTGGTT
ACTGTGTGGA ATTTTTGGAT TAATCTTAAA CTCAGTTGGC GAGTGACTCA AGTTAAATAA
|
|---|
| Protein sequence | MTYPILKNLL KTPSGSLQIP LNPNGEINGA DQDNKTSKPV QFSLIIPTYN ERGNINYIIE
SLTRLLDPFL PNDYELIIVD DNSPDHTWEI AESLTLTYPQ LRVMHRTEEK GLSSAVIRGW
QVARGEILGV IDADLQHPPE ILLKLLNCIQ QGADLAVASR HVDGGGVSEW SLIRRFLSRG
AQLLGLIILP SVVGRVSDPM SGYFMVRRRA IAGPILNPLG YKILLEVIGR GNIETIAEVG
YVFQERQEGE SKVTWKQYIE YILHLIRLRS RGRIARLRQQ FNFPVGRFIR FGLVGLSGVF
VDMTLLYLLS DSTTLGWELT RSKIIAAEVA IINNFLWNDR WTFGDLSSQQ RGWNQRLKRF
LKFNMICLAG LVLNVLLLNL FFNIFGINRY VANLIAIALV TVWNFWINLK LSWRVTQVK
|
|---|
| |