Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1899 |
Symbol | |
ID | 7109900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 2127217 |
End bp | 2127771 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643480159 |
Product | Shikimate kinase |
Protein accession | YP_002377199 |
Protein GI | 218438870 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000000000000431404 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCAAATT TACTTAAAGG ACTGAGTATT TTTCTGGTCG GTTTGCCGGG AACAGGTAAA ACTACAGTAG GACAAGGGTT AGCGGAACAA TTAGACTATC GTTTTTTTGA TAGTGATGTT GTGATTAAAA AAGTGACGGG TCAAACTATT AAGGAAATTT TCGCTACACA AGGAGAAGAC TTTTTCCGAG AGTTAGAGTC TCAAGTTTTA CGAGAACTGT GTGCTTATAC GAGAAGCGTT ATTGCTACGG GTGGAGGAAT AATTTTAAAA CAAATCAACT GGAGTTATCT ACGTCATGGG TTAATTATTT GGTTAGATGC TCCCGTAGAT TTACTGATAC AACGGTTAGC TGATGATAGC AATAGAGATG ATCCCAATAG ACCTTTACTT CAAGTAGATG ATCTTGATGA GCTTAGACAG AAGCTAGAAT TTTTATTAAG TCAGAGACAA TCCTTATATG CAGAGGCAGA TTTAAGAATT GCTATCACAT CTGAGCAAAC CCCTGATGAT ATTGTCTCAC AAATCGTCAC CCAAATTCCT ACTGTTTTAA ATTGA
|
Protein sequence | MSNLLKGLSI FLVGLPGTGK TTVGQGLAEQ LDYRFFDSDV VIKKVTGQTI KEIFATQGED FFRELESQVL RELCAYTRSV IATGGGIILK QINWSYLRHG LIIWLDAPVD LLIQRLADDS NRDDPNRPLL QVDDLDELRQ KLEFLLSQRQ SLYAEADLRI AITSEQTPDD IVSQIVTQIP TVLN
|
| |