| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1893 |
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| Symbol | |
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| ID | 7109894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 2119699 |
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| End bp | 2122296 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643480153 |
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| Product | diguanylate cyclase/phosphodiesterase with Chase sensor |
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| Protein accession | YP_002377193 |
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| Protein GI | 218438864 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 2.64169e-22 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAGTTA AGCCTCTTCA GAAAATTCAA TGGTTAGTCT CTAAAATGCC ATTTTTGCCC
AAAAAATCAA GCCTAGAGAC TAAAGCCGTA TTATCTCAAA TTTCTTTTAC ATTTGTAGCC
AGTTTAGCGA TCGCAGGACT TGTCATCGGG GTGAGACAAT CGAAAATTTT ACAACCAGTC
GAGCTAGATA TTTACGATCA GATGGTTAAA CTATCGCCTC AATTACCGGC TGATCCTCGA
TTACTGATTA TAGAGATTAC AGAAGACGAT ATCCGAAAAC AGAATAGATG GCCCTTGAGC
GATGAAACGA TCAATCAATT GATCAATACT GTACAACAGT ATGATCCTAA AGTTATCGGT
TTAGATCTGT TTCGGGATGT TCCTCATCCG CCGGGGAGCG ACAAACTGAC TCAAACTTTA
GCAGCCGATA ACATTATTGC GGTAAAAAAA TTAAATGATG ATGGCTCTTC TGAATTAAAA
CTTCATCAAG GAATAACAGA TGAGCGGGCG GGTTTTGCCG ATATTCCTAT TGATTTTGAT
AATGTATTAC GGCGCTATCT GCTCTATGCT AGGGTCAATG AAAAGCCTCT TTACTCCTTT
GCCTTACGGG TTAGTTTAAA GTATTTAAAT AATGACCACT TTCCTTTCAA GGTTCATCCC
GAAGCTTTAC AAATTGGCTC AACGGTTTTT GAAGATTTAA AAGCAGATTC AGGTAGCTAT
CAGATGGAAC CGGAGGAAGT CATCGGATGG CAAATTTTAC TTAAATATCG GTCTGATGAT
CTTGAAGAAA GTGGCCGTAA TGTTGCCCGA AAAATTTCCT TAACTGAGGT ACTTCAAGGC
AAATTAGAGC CAAGTTGGGT AAAAGATAAA ATCGTGCTAA TTGGGACTAC TGCCCCCAGT
GAAAAGGATA TGTTTGCTAC TCCTTATAGT CAAGGGGAAA CGATTAATTA TTTTATGCCT
GGGGTAGTGA TTCATGCTCA GATGGTGAGT CAAATTCTCA GCACAGTTTT AGATCAGCAA
CAACAATTTT GTTTTTTTCC TCAATGGGGA GAATTTTTAT GGATTTGGGG TTGGTGTTTT
ATCGGCGGAA TAGTGGTTTG GCGTTTTAAT TCTCCTCAAT ATTTTATCGG CATCGGGTTA
ATGATTATTA GTGGACTCTG GGGATTTGGT TTTTTAGTAT TTACTCAATC CGGTTGGATT
CCGGTTTTGC CTCCTATTCT GGGCTTAATT GCAACCGGAG GAACGGTTTT AATTTATAAA
TTTGTCTCTA ATTATTATTA TGATTCTTTA ACTTATCTTC CCAATCGACG ATTTTTTGTC
AGCCAACTTC AAAAGATGAA TAAGCATCAA AAAGCTGACA ATAGTGAGTT AACCGCCGTT
TACTTTTTGG ATATCGATCG GTTTAAAGTG ATTAATGAAG GATTAGGACA CGAAGCCGGG
GATTTTGTCC TTTTAGAAAC AGCCCAACGA CTTCAAGGAC AATTAAACAA TAAAGCTCAA
CTGGCTAGAG TGGGAGGAGA TGAATTTGCG ATTTGGTTAA ACTCTTTGGT GAGTATTGAT
GAAGCTACAG AAATAGCCAA CTATTTGCAA CAAATTTTAA ATCAGCCTTT CTTTTGGAAA
GGTCAAGAAA TTTATACCAG TGTTAGTATT GGCATTGCTT TTAATCGGAC TGGGGCTAAA
TTTAACTCTG AAGAATTGCT ACGAGATGCT AATATTGCCA TGTATCAAGC GAAGAATTCA
GGGAAAGTTC ATTATGAAAT GTTTGCTTCA GGTATGCGAG AACAAGTGAT CAACCGTTTA
CAAATAGAAA CCGATTTACG TCGAAGCATA AAACAGCAAG AATTTCAGTT ATTTTATCAA
CCTATTATCT CTCTCAAAAC GGGAAAAATT GCCGGGGTTG AAGCTTTAGT GCGGTGGAAA
TCAGTCAAAC GAGGGTTTAT TTCTCCCGGA GAATTTATTC CTATTGCTGA AGAAACCGGA
TTAATTATTC CTCTGGGAGA ATGGATTTTA CAAGAAGCCT GTTCTCAAAT GAGACAATGG
CATCAACAAT TTTCTCAAAA TCCGCCTTTA TTCATTAGTG TTAATCTTTC GGGTCGGCAA
TTTTCTCAGC CCAATTTAGT GCAACAAGTT CAATATATTT TGGAGACTAT CAATTTAGAA
CGGAATACTT TAAAGTTAGA AATAACCGAA AGTATGATGA TGAATGATGT AGAAGCCGCC
ATTGATTTAC TGAGACGACT GAAAGATTTA GGCTTAAGAT TAAGTATTGA TGATTTTGGA
ACAGGATATT CTAATTTAAG TTATCTTCAT CGTTTCCCTA TAGATACTCT AAAAATCGAT
CAATCCTTTG TTCGTCGGAT GAACAGTCAA GAAAGTCAAG ATAGATACGC TCAAATTGTC
CGAACGGTAA TTATGTTAGG ACATAATCTA GAGTTAGATG TGATTGCGGA AGGAATCGAA
ACAGAAGAAC AGATGCACAT TCTTAAATCT CTCGGTTGTG AATATGGACA GGGCTATTAT
TTTGCTAAAC CTCTTCCGAG TCCAGAGGTG ACAGAGTTAT TAAAAAAAGA TCCTCAATGG
TTAACCTTTA AACCTTGA
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| Protein sequence | MKVKPLQKIQ WLVSKMPFLP KKSSLETKAV LSQISFTFVA SLAIAGLVIG VRQSKILQPV
ELDIYDQMVK LSPQLPADPR LLIIEITEDD IRKQNRWPLS DETINQLINT VQQYDPKVIG
LDLFRDVPHP PGSDKLTQTL AADNIIAVKK LNDDGSSELK LHQGITDERA GFADIPIDFD
NVLRRYLLYA RVNEKPLYSF ALRVSLKYLN NDHFPFKVHP EALQIGSTVF EDLKADSGSY
QMEPEEVIGW QILLKYRSDD LEESGRNVAR KISLTEVLQG KLEPSWVKDK IVLIGTTAPS
EKDMFATPYS QGETINYFMP GVVIHAQMVS QILSTVLDQQ QQFCFFPQWG EFLWIWGWCF
IGGIVVWRFN SPQYFIGIGL MIISGLWGFG FLVFTQSGWI PVLPPILGLI ATGGTVLIYK
FVSNYYYDSL TYLPNRRFFV SQLQKMNKHQ KADNSELTAV YFLDIDRFKV INEGLGHEAG
DFVLLETAQR LQGQLNNKAQ LARVGGDEFA IWLNSLVSID EATEIANYLQ QILNQPFFWK
GQEIYTSVSI GIAFNRTGAK FNSEELLRDA NIAMYQAKNS GKVHYEMFAS GMREQVINRL
QIETDLRRSI KQQEFQLFYQ PIISLKTGKI AGVEALVRWK SVKRGFISPG EFIPIAEETG
LIIPLGEWIL QEACSQMRQW HQQFSQNPPL FISVNLSGRQ FSQPNLVQQV QYILETINLE
RNTLKLEITE SMMMNDVEAA IDLLRRLKDL GLRLSIDDFG TGYSNLSYLH RFPIDTLKID
QSFVRRMNSQ ESQDRYAQIV RTVIMLGHNL ELDVIAEGIE TEEQMHILKS LGCEYGQGYY
FAKPLPSPEV TELLKKDPQW LTFKP
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