Gene PCC7424_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1872 
Symbol 
ID7109873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2088181 
End bp2089302 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content38% 
IMG OID643480132 
Productpeptidase M50 
Protein accessionYP_002377172 
Protein GI218438843 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGGA ACATTCGTGT CGGTAACTTA TTTGGGATTC CTTTTTATGT GAATCCTTCT 
TGGTTTTTAG TGTTGGGGTT AGTAACCTTA AGTTATGGGG GTGATTTAGC CTTATCTCCT
CAATTGACTG GCTTAACCCC TTGGATATTA GGATTTGTAG CCGCGCTGCT ATTATTTGCC
TCAGTGGTTG CTCATGAATT AGGTCATAGT TTAGTGGCCA TTTCTCAAGG TATTGAAGTA
AAATCTATCA CCCTGTTTTT ATTTGGGGGT TTAGCTAGCT TAGGAAAAGA GTCTGAAACT
CCGCTACAAG CTTTTTTAGT GGCTATTGCT GGGCCGGTTG TTAGTTTACT GCTCTTTGGT
TTATTCTTAG TGATCGGGAC TCAAGTTCCT TTACCGACTC CTTTTAGTGC CATCATTTCT
TTATTAGCTT ATATTAATTT AGCGTTAGCT ATTTTTAATT TAATTCCGGG TTTACCCTTG
GATGGAGGAA ATGTTTTAAA ATCTCTAGTC TGGAAAATTA CAGGAAATCC TAATAAAGGG
GTCATTTTTG CGAGTCGAGT CGGTCAAGTT TTCGGGTGGT TAGCGGTCAT TATTGGCGCT
CTATCCATCT TGGGAATTAG TCAAGTGGGG AATTTTTGGA CGTTATTAAT CGGATTCTTT
TTATTACAAA ACGCTGGATT TTCTGCCCAA TCTGCTAAGG TTCAAGATAC ATTAAGCAGT
TTTCAGGTTG AAGAGGCGGT TATTCCCGAT AGTCCTATTG TTCCGGCTGA CTTAACTTTA
CGAGAGTTTG TTAATGATTA TGTCATCGGT AAAAAGGAAT GGAAAAGGTT TTTAGTGATT
GATGAAAATC AAAAACTCTT AGGCATTCTT TCAATTGATA GCTTAAAGCT GGTGTCTACT
TCTCAATGGA CAGAAGTTAA AGTAAAAGAA TTAATTCAAC CGGCGGATAA TTTACAAACG
ATTCAATCCG ATCAACCTTT ACTAGAAGCG GTTAAAATTT TAGAAAATCA AGCCATTCCC
CAATTAACGG TTATTCGGGA AGATGGGACA GTGGTAGGAT TACTAGAAAA GAGTTCTGTT
GTGAGATTAT TACAAGAAAA AACCCGAGTT AAAGCCGCTT AA
 
Protein sequence
MNGNIRVGNL FGIPFYVNPS WFLVLGLVTL SYGGDLALSP QLTGLTPWIL GFVAALLLFA 
SVVAHELGHS LVAISQGIEV KSITLFLFGG LASLGKESET PLQAFLVAIA GPVVSLLLFG
LFLVIGTQVP LPTPFSAIIS LLAYINLALA IFNLIPGLPL DGGNVLKSLV WKITGNPNKG
VIFASRVGQV FGWLAVIIGA LSILGISQVG NFWTLLIGFF LLQNAGFSAQ SAKVQDTLSS
FQVEEAVIPD SPIVPADLTL REFVNDYVIG KKEWKRFLVI DENQKLLGIL SIDSLKLVST
SQWTEVKVKE LIQPADNLQT IQSDQPLLEA VKILENQAIP QLTVIREDGT VVGLLEKSSV
VRLLQEKTRV KAA