| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1855 |
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| Symbol | |
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| ID | 7109856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 2064140 |
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| End bp | 2067997 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643480115 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_002377155 |
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| Protein GI | 218438826 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2203] FOG: GAF domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAA AAATAGCTTA CTCTGGCAGA AAGTCAAATC GACTCTCGCG GCAATTCTTA
AAAACAAATA GTCGCTTTAA GCAATTAGAG ACAGAAAAAC AACCTATATC TCTCCAAATA
GATCGACAAA AGACGTTATT AGCCGTTATT ACTAAAATTC GGGAATCTCT CGATTTAACC
ACTATTTTTA AGTCTACTGC TCAAGAAGTC CGTCAACTCC TCAACGCCGA TCGGGTGGGG
ATCTTTCGCT TTTTTCCCGA TTCCAATTGT ACGAAAGGGG AATTCGTGGC TGAAGATGTT
TTACCGCCCC TAGAATCTAC CCTAGACTTT ATTATTGAGG ATAGCTGTTT TCAGCAGAAC
TATACCGCGA AATATCAACA AGGAAAAATT TATGCCATTG AGGATGTTGA AACAGCAACC
CTCGAAGAGT GTTATCTCGA TCTACTGAAA AAATTTAACA TCCGAGCGAA TTTAGTTGTT
CCTTTACTCC ACGAACAACA GCTATGGGGA TTATTGTGTA TTCATCAATG TCGCCAACCC
CGACAATGGC AAGAATCAGA GATAGAATTT ATTAGTCAAA TCGCCCTACA TTTAGGCATA
GCGGTACAAC AAGCTGAAAA AATAGCCCAA TTACAAGGAA AATCCGCTCA ACTGAGTGCT
TCTATTCAAC GAGAAAAAGC ACTCGCCACC ATTGTCAATA AAATTCGTCG TTCCCTCAAT
CTCAATACCA TTTTTCAAAC CACTACCCAA GAAGTCCTAG AGTTAATTAA AGCCGATCGG
GTGGCAATTT ATCGGTTTAA TTCTGATTGG AGTGGAGAAT TTATTGTTGA TTCTGTTACC
TCCCAATGGA CTTCTTTAAT GAAGACTCAA TTGATTCATA CAGAACTCTG TGAAAATATT
AGCGAATGTA GCGTTAAAAA TTTAGTTAAC CCGCAACTCA CAGATACTTA TCTCCAAAAA
ACTCAAGGGG GACAATTTTC CCAAAATGAC TTATTTCGGG TGTGTAATGA TATTTATCAT
GCCGGGTTTT CTGACTGTTA CATCAATATT TTAGAACTCT GTCAGGCGAG AGCTTATGTC
ATCGTCGCCA TTTATGAAGG GGAAAAATTA TGGGGGTTAC TCGCCACTTA TCAAAATTCG
GGGGTTCGTC ATTGGCAGGA AACAGAAGTT AATTTCTTAG TGCAAATTGC GGCACAGTTA
GGAGTAGCTA TTCAACAAGC GGAATTACTG GCTCAAACTC AAAAACGCTC TGATCTCCTG
CAAACTACTC TCGATACAGA ATTAAAAAAA CGAGCGGAAG AATTAGCCTT GGAAGCGAAA
CAAGAAAAAG TTTTAGCGGA AGTCATCGAT AAAATTCGTC AAACTCTCGA TCTTGATACC
ATTTTTCAAA CCGCTACCCG TGAAATTCGT CATCTCCTCA CAGCAGATCG AGTGGGAATT
TTTCAGTTTA ACCCGAATTC TAATTGTCAA CAAGGAGAAT TTATTTCCGA GGATTTTACG
CCCCCTTATT CCTCAGTTTT AGAAGAAAAA GTTGAGGATC ATTGTTTTGG AGAACACCAT
GCTAATTACT ATCAAGAAGG TCAGATTTTT GCCATTGCCG ATATTACCCA AGCCGGTTTA
AGTGAATGTC ACCATGATAT TCTCTCTCGG TTTCAAGTTA AAGCGAATTT GGTTTTCCCC
TTACTCAAAA ATGATCAACT TTGGGGGTTA TTGTGTATTC ATCAATGTAG TGCCCCTCGC
TTCTGGCAAC CTCAAGAAAT CGAATTTGTC CGTAAAATTA CGGTTCAGTT AGGGGTAGCC
CTACAACAAG CGGAATTATT AGTACAAGCA CACAATCGTT CCGCCGAATT GAGTCAAGCG
TTAGCCCAAG TAGAAGCGCA AAAAGAACAA CAAGCGCAAG TCGCCCAACA AGAACGGACT
TTAGCCCGCA TTATTGAACA GGTTCGCCAA ACTTTAGACA TTGATACCAT TTTTGGGGCA
ACCACTCACG AACTTCGACA AGTGTTAAAC TGCGATCGAG TAGTCGTCTA TCGTTTTTTT
GCAGATTGGA ATGGAGAATT TGTCTATGAA TCCATGAGTG AAGGTTGGAT GCCTTTAATT
GTCGGTAATA CTAAAACCGT TTGGCGAGAT ACCTACTTTC AAGATACCCA AGTTAGTCGG
TATCACAATC ATGAAACCTT TGCCGTTGAT GATATTTATC AAGCAGATTT AACCCCATGT
CATCTGGAAA TGTTAGAACT TTTTCAAATC AAAGCTTATA TCGTTGCACC GGTTTTTGTT
GGGGATAAAC TGTGGGGTTT ACTCGGCGCT TATCAAAATA CAAATCCTCG TCACTGGGAA
GACAGAGAAA TCTCTTTAAT GGCAAGAGTA GGAGATCAAT TAGGGGTTGC TATGCAACAG
GCCGAACTTC TTGAACAACT GACAAAAGCC AAAGAAACTG CTGATGCTGC TAATAAAGCT
AAAAGTGAAT TTCTCGCCAA TATGAGTCAT GAATTACGAA CCCCTCTCAA CGCCATTTTA
GGGTTCACTC AATTATTAGC TAGGGATTCT TCTTTAAGTG ATAAACAACA CGAATATGTA
GGCATTATTG GCCGATCTGG AGAACATTTA CTCAGTTTAC TCAATGATGT TTTAGAAATG
TCGAAGATTG AGGCGGGTCG AATTACTCTT AATGAAAATC ACTTCGATTT ATACCGTCTT
TTAAATACTT TAGAAGAAAT GTTTCAATTA AAAGCACAAT CAAAAGGATT ACAGTTAATT
TTTGATTGTC ATCCTGACGT TCCTCAATAT ATTAAAACCG ATGAAAGTAA ACTGCGTCAG
ATTTTAATTA ATTTAATCGG CAATGGCATT AAATTTACAG AAGTAGGCAG TGTTATTTTA
AGGGTTAAGC TATCACTCTT AAGCACCATG ACTATTGATT TTGAAGTAGA AGATACCGGA
TTAGGCATAG CTCCCGAAGA ACTCGATACC TTATTTCAAC CCTTTATCCA GACGGTAAGC
GGACGCAAAT CTCAAGAAGG AACAGGTTTA GGATTACCCA TTAGTCAAAA ATTTGTCCAA
TTAATGGGAG GAAATATCTC AGTTAAGAGT AACCTAAATA AAGGCTCTAT GTTTAGGTTT
GAAATTCCTT TTACTCAAAG TGAATCCGCC CAAGTTTCCC AACCCATTAA AGATCTTCAA
ATTATAGGAT TAGAACCTAA TCAACCCATT TATCGGATTC TCATTGCTGA TGATAAATGG
GAAAGTCGTT TGATGTTAGT TAATCTTTTA TCTCCCCTTG GATTTGAAGT TCGTGAAGCA
GAAAATGGAC TCCAAACCGT TGAACTTTGG CAAAGTTGGA GTCCTCATCT AATATGGATG
GACATGAGAA TGCCGTTGAT AGATGGGTAT CAAGCTACAA AACAGATTCG AGAAAAAGAG
TCTATGACTT CCACTCAACA GCGAACTAAA ATTATAGCTC TAACCGCCAG TGTTTTAGAT
ACACAAAGAA TGACCGTTTT TAATGCAGGG TGTGACGATT TTGTGGCTAA ACCTGTCCGA
AAAGAAAAGG TTTTTGAGAA GATAGCTGAA CATTTAAAGG TTCGATATAT TTATCAACAA
GAGACTCAAC CTAAACCTCA ATCTCAACCC TTACTTTTAT CCAATTTTGA GAGTTTAAAA
TCAGCGATCG CACAAATGCC CCAAGAGTGG ATCACTGGCT TGAAAAATGC TGTTCTGAGT
GCTAGAGAAA AAAGAATTCG TCAGTTAATT GAACAAATTC CTCAACAGGA TTCTCCTCTG
GTTAAGACTT TAACCCAATT CCTCAATAAT TTAGCTTATG AGAAAATATT AGAGTTAATT
AATGTTGACT TAAATTAA
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| Protein sequence | MSRKIAYSGR KSNRLSRQFL KTNSRFKQLE TEKQPISLQI DRQKTLLAVI TKIRESLDLT
TIFKSTAQEV RQLLNADRVG IFRFFPDSNC TKGEFVAEDV LPPLESTLDF IIEDSCFQQN
YTAKYQQGKI YAIEDVETAT LEECYLDLLK KFNIRANLVV PLLHEQQLWG LLCIHQCRQP
RQWQESEIEF ISQIALHLGI AVQQAEKIAQ LQGKSAQLSA SIQREKALAT IVNKIRRSLN
LNTIFQTTTQ EVLELIKADR VAIYRFNSDW SGEFIVDSVT SQWTSLMKTQ LIHTELCENI
SECSVKNLVN PQLTDTYLQK TQGGQFSQND LFRVCNDIYH AGFSDCYINI LELCQARAYV
IVAIYEGEKL WGLLATYQNS GVRHWQETEV NFLVQIAAQL GVAIQQAELL AQTQKRSDLL
QTTLDTELKK RAEELALEAK QEKVLAEVID KIRQTLDLDT IFQTATREIR HLLTADRVGI
FQFNPNSNCQ QGEFISEDFT PPYSSVLEEK VEDHCFGEHH ANYYQEGQIF AIADITQAGL
SECHHDILSR FQVKANLVFP LLKNDQLWGL LCIHQCSAPR FWQPQEIEFV RKITVQLGVA
LQQAELLVQA HNRSAELSQA LAQVEAQKEQ QAQVAQQERT LARIIEQVRQ TLDIDTIFGA
TTHELRQVLN CDRVVVYRFF ADWNGEFVYE SMSEGWMPLI VGNTKTVWRD TYFQDTQVSR
YHNHETFAVD DIYQADLTPC HLEMLELFQI KAYIVAPVFV GDKLWGLLGA YQNTNPRHWE
DREISLMARV GDQLGVAMQQ AELLEQLTKA KETADAANKA KSEFLANMSH ELRTPLNAIL
GFTQLLARDS SLSDKQHEYV GIIGRSGEHL LSLLNDVLEM SKIEAGRITL NENHFDLYRL
LNTLEEMFQL KAQSKGLQLI FDCHPDVPQY IKTDESKLRQ ILINLIGNGI KFTEVGSVIL
RVKLSLLSTM TIDFEVEDTG LGIAPEELDT LFQPFIQTVS GRKSQEGTGL GLPISQKFVQ
LMGGNISVKS NLNKGSMFRF EIPFTQSESA QVSQPIKDLQ IIGLEPNQPI YRILIADDKW
ESRLMLVNLL SPLGFEVREA ENGLQTVELW QSWSPHLIWM DMRMPLIDGY QATKQIREKE
SMTSTQQRTK IIALTASVLD TQRMTVFNAG CDDFVAKPVR KEKVFEKIAE HLKVRYIYQQ
ETQPKPQSQP LLLSNFESLK SAIAQMPQEW ITGLKNAVLS AREKRIRQLI EQIPQQDSPL
VKTLTQFLNN LAYEKILELI NVDLN
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