Gene PCC7424_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1800 
Symbol 
ID7110458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2005350 
End bp2006147 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID643480059 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002377100 
Protein GI218438771 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCA GTTTGCAAAA TCCCCTCATT AAACAGATGC GTAAACTACA CCGACCGAAA 
GGACGACGGG AACAAAATCT GTTTTTAATT GAAGGAACGC ACTTATTGGA GACGGCCTGT
TCTGTAAATA GTTCCCTGGA TGTAGTTTGT TGTACGCCTC AATGGCAAAC TAATCATAAG
CAATTATGGG AAAAAGCTCA ATCATTGGCA CAACGGACTG AAGTTGTCAC CCCAGAAGTG
TTGGCAGCGA TCGCAACGAC GATTAATCCG GATGGAGTGG TAGCGAGTGC GACTCGGATT
TTTGAGGATT CTTTGGCTAA ATCTCCTTTA TCTTTGGGAT TAATGCTAGA ACGGTTACAA
GATCCGGGCA ATTTAGGCAC AATTATTCGG ACTGCCGTCG CTACAGAAGT AGATCAATTA
TGGTTAACCC ATGATAGTGT TGATCTCGAT AATCCTAAAG TATTAAGAGC GTCAGCCGGA
GAATGGTTTC GTGTCCCGAT GAGAGTAAGC GATAATTTAG GGGCACTCAT TGAAGGGTAT
AAACGCCAAC AGGTTCAAGT GATTGGAACT TTACCCCAAG GCAATAAAAC TTACTGGGAG
ATTGATTTTA CCCGTCCTAC GTTAATTTTA TTGGGCAATG AAGGAGCCGG TCTGACACCG
GAGTTAGTTT CTTTAGTTGA TCAACAGGTC ACTATTCCTT TAGGGGGAGG AGTAGAATCT
TTAAATGTAG CGATCGCAGC AGCCCTATTA TTGTACGAAG CAAAACGACA AAAACAATTG
ACAATTGATA ATGGATAA
 
Protein sequence
MITSLQNPLI KQMRKLHRPK GRREQNLFLI EGTHLLETAC SVNSSLDVVC CTPQWQTNHK 
QLWEKAQSLA QRTEVVTPEV LAAIATTINP DGVVASATRI FEDSLAKSPL SLGLMLERLQ
DPGNLGTIIR TAVATEVDQL WLTHDSVDLD NPKVLRASAG EWFRVPMRVS DNLGALIEGY
KRQQVQVIGT LPQGNKTYWE IDFTRPTLIL LGNEGAGLTP ELVSLVDQQV TIPLGGGVES
LNVAIAAALL LYEAKRQKQL TIDNG