| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1733 |
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| Symbol | |
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| ID | 7110391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1921025 |
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| End bp | 1922641 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643479995 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002377036 |
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| Protein GI | 218438707 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.020269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATTT TGGGATTATT CAGTCGATTT TCGGTAAAAG TATCCTCTCA AGAAGTTTTC
CATGATTATT CCTATTGGGC GCAATTGTGT GAAACTTTCG CCCAAATAGA AGATTATGAA
CAAGCTAACG CCGCTTGTAA TAGCGCTATC TCCCTAAATG CCAAAGATCC CAAGATTTGG
GAAATCTGGG CTAACGTTTT ACTAAAATTG CAAAAATATC CCCAAGCGTT AGTCTCATTT
CAACAACTAC TACGACTTAA ACCGGAATCC TCTTTTGCTT CTATTGGTGA ATGTGAAGTC
CTTTATAATC TTAACCAATA TGAACAAGCG ATCGGCTCTT GTGAATTGGC GTTAAAAAAG
GATCAGTCTT GGCAAAATGC CTCCCCCCAA AGAGCATGGT ATTTTCGCGG GGAAGCGTTT
CGTCAGTTAA ATCAACTGGA AAATGCTTTT TTCTCCTATG ATTGGGCAAT TAAAACCGAT
CCTACTTATT CTCCGGCTTT TTCCGGTATG TGCTTAGTTT TTTTTCAGGA AAATCAATAT
CAATCAGCAC TAGAAGCTTG TCAAACAGCC CGTTTTAATA ATTCTTGGGA TGGTTTGGAA
ACTACCCTAG CATGGGAATA TGAAGGGAAA ATTTATCATC AATTACAACA ATATTCCCAA
GCACTGAATG CTTACAATGA AGTTTTGGCA AGAGAACCCC AAAATGGCCT AGTTTGGCGA
CGAAAAGCGG AAATATTAGA AACGATTGGC AATTATTCCC AGGCTATTAC AGCTAACGCT
TGGGCGTTAC AATTTATGCC TGATGATCGC TTAACCTTAA CCCAACAATG CGCCCTCCTC
AATCTCATTA GTCAGTCAAC CCCCCCCGCT AATGTAGCCA GCAACAGCCA AAATAAAGAG
ACTAACAAAG ATAATCAAGG TCAAGGTTCA GAACAAAACG ATTATACTAA AGCTTTAGCG
AGTTGTGATC AAGCCTTACA AAAAGGGACA GGAAACTGGA ACGAGTTAGG ACCGGCTTTA
GCTTGGAATC AGCGAGGGAA TGCCTTAATC GGTTTAAAAC GCTATGAAGA AGCACTTGAG
TCTTTTGAAA AGGCGCTTTC TTTAGAACCT AACTATGGGG AAGCTTGGAG GAATCGTTCT
GTGGCATTAT GGCACTTAGA GGAGTATCCT CAAGCTTTAA TGTCTGTTGA ACAAGCTATT
ACTATTAATC CAATGGATTC TCAAGCATGG TTTAATAAAG CTATAATTTT GACCCAACAA
AAGCAGTACA ATGAAGCGAT TACCGCCTAC GATCAAGCTT TAGCAGGAAA TATTAATTAT
CAATCTCCCA GTGCTAAAGT GCCCATTTTA GTTAATCAAA GTGCCGTTTT TTGGCAACTT
AAACAATATC AAGCTGCCTT ACTTAGCGCT CAATCTGCTT TAGATCTTAA TCCTGATTCC
TTGGCAAAAA CCAAAGCTTT ATATAATAAA AGTCTGGCTT TAATTTCTTT AGAAAACTAT
CAGCAAGCAG AAGAAACATT AAAATATCTT TTAGAAATAG CACCGGAAAA TCAATCGGCT
CAAGATGCCA TGAAATTTAT TCAACAAAAA ATAAATTCAA TGAATGAACA GAAATAA
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| Protein sequence | MLILGLFSRF SVKVSSQEVF HDYSYWAQLC ETFAQIEDYE QANAACNSAI SLNAKDPKIW
EIWANVLLKL QKYPQALVSF QQLLRLKPES SFASIGECEV LYNLNQYEQA IGSCELALKK
DQSWQNASPQ RAWYFRGEAF RQLNQLENAF FSYDWAIKTD PTYSPAFSGM CLVFFQENQY
QSALEACQTA RFNNSWDGLE TTLAWEYEGK IYHQLQQYSQ ALNAYNEVLA REPQNGLVWR
RKAEILETIG NYSQAITANA WALQFMPDDR LTLTQQCALL NLISQSTPPA NVASNSQNKE
TNKDNQGQGS EQNDYTKALA SCDQALQKGT GNWNELGPAL AWNQRGNALI GLKRYEEALE
SFEKALSLEP NYGEAWRNRS VALWHLEEYP QALMSVEQAI TINPMDSQAW FNKAIILTQQ
KQYNEAITAY DQALAGNINY QSPSAKVPIL VNQSAVFWQL KQYQAALLSA QSALDLNPDS
LAKTKALYNK SLALISLENY QQAEETLKYL LEIAPENQSA QDAMKFIQQK INSMNEQK
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