| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1654 |
|---|
| Symbol | |
|---|
| ID | 7108535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1829948 |
|---|
| End bp | 1830631 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643479919 |
|---|
| Product | glycoside hydrolase family 24 |
|---|
| Protein accession | YP_002376960 |
|---|
| Protein GI | 218438631 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4678] Muramidase (phage lambda lysozyme) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTAGAT CAGCCCGTTC TCGGACTCGC AAAAAGATCA ATCCTTTAAA ACTTCTTCGT
TTAGTTAGTC TCAGTGTTAT TGCAATCTTA TTGTTGAATG AATTTAGGGA GCAAATCCAA
CGGCGATCGC CTCTTGTCCC TTTTTTTAAC GGGTACGAAC CTCAACCCCT AGTCATGACT
GGGGGTGATC CTTATATTCG CGCCTTAATG CGAACGATTA CCGCCAGTGA ATCTAATGTA
GAGCGCCCCT ATAATGTGCT TTATGGGGGT AAATATGTGT CAGATTTAAG TAAGCATCCT
CAGCAGTGTG TGCCTATTGT TACGGGGCCG AATGTAGGTA ACTGTACCAC AGCAGCCGGG
CGTTATCAGT TTTTAAATAC GACTTGGTAC GAAAAAGCGG AGAAATATCA TCCCAGTCCT
TCTGGGTTGT TGTGGTGGAA GTCTTATAGT TTTGAACCCG AATATCAAGA CCGGGTTATT
TATGCGTGGT TAAAAGATCC TCAAGCTTGG GGGGTGAATA TTTCTCAATT ACTCAAAGAG
GGAAAAGTTG AAGAAGTTTT ACGGTTATTA TCGGGAACTT GGACGAGTTT AGGGTACGGG
ATAGAAACTA ATTCGATGAG TCCTCATTTA CCTAAAATAT ACGAGAAAAT GTTGCGACAA
GAATTAGGTC ATCACATCAG CTAA
|
|---|
| Protein sequence | MSRSARSRTR KKINPLKLLR LVSLSVIAIL LLNEFREQIQ RRSPLVPFFN GYEPQPLVMT
GGDPYIRALM RTITASESNV ERPYNVLYGG KYVSDLSKHP QQCVPIVTGP NVGNCTTAAG
RYQFLNTTWY EKAEKYHPSP SGLLWWKSYS FEPEYQDRVI YAWLKDPQAW GVNISQLLKE
GKVEEVLRLL SGTWTSLGYG IETNSMSPHL PKIYEKMLRQ ELGHHIS
|
|---|
| |