Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1635 |
Symbol | |
ID | 7109635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1801605 |
End bp | 1803362 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643479900 |
Product | Polypeptide-transport-associated domain protein ShlB-type |
Protein accession | YP_002376941 |
Protein GI | 218438612 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.309745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TTCAACTCCA AAAAAAACGC CACTGGCAAA AGGGGGTGCT AGTTAGTGCT TGTTTGGTGA CAATGGGCTT AATTTCGGAA AAAACTCAGG GATTAGCTTA TGCTATCCCA GGATCTCCTG ATATTTTTAG ATTAAAAAAT CAAGAGAAAA AATTTTCCGA TTCTATTGCT AATTTTCCGT TAAATTCGCC TGAAATTATC GGTCAAAATA ACAATAATAA AACTCCAATT CTAATAGAAA AAGTCCAGGT AGAAGGAAGC ACCGTATTTA CATCTGAAGA TTTTGCGCCC ATTATCCAAC CAATAGAAGG AAAAACCGTT ACACAACAAC AATTAAGAGA AGTGGTGAGT GCTATCACCC AACTCTACAT CAATGAAGGA TATCTTAACT CTAGAGCGGT ATTAGTGGGG ATCAGCGATG GAGTAGCGGT GATCGCCATT TCCGAAGGGA CGATTGGCAA CATTGAGATT GAAGGAACGA CAAGATTACA AAATTATGTT CGTTCTCGGA TAGAATTAGG CATCGGCACG CCCCTGAATG CCCGAAAATT AGAAGATCAA CTGCGCTTAC TCAGAAGCGA TCCCCTCTTT AAAAACGTAC AAGCGACTCT ACAACCCCCC CAAGAAGACA CACCCGTCAC ACCCGGAGAA GAAAAAGCCA GGAGTACCCT AGTCGTAACT GTGACAGAAG CCGATCCTTT TGCCGGCAGT GTGGGAGCAG ATAATTATTC CCCGCCGAGT ATAGGCGCAA CCCGGTTTAA TCTTAATCTG CTGTATCGCA ATCTTACGGG AATAGGGGAT CAAATAGCCA CCTCTTACCG TCCCCGTTTT GAAACTTGGG ATGGGACTTA TAGTCTAGAC TTGGCCTATC GCGCTCCCCT CAACCCGATG GATGGAGCAA TTACGTTTAA TGCTTTAATT GAGCGAAACC GAGTGATTCA AGGGGTAGAA AACATCGATC TTCTCAATAT TGGGGGGAAT TCAGAACGCT ATACCCTCGA CTACCGACAA CCTCTGAAGA GGACAACCCG GGAAGAATTA GCCTTATCTA CGGGATTTAG CTATTATAAT GGTCGGACAT TTCTCGATGA TGAACCGTTT CCTTTTGGGT TTGGCCCTAA TGACCAAGGG GTGACCATTA CCAGTGTATT TACCTTTGGA CAAGAATACA TCCGTCGTCA AAGAACTGGT GCGTGGGGGG TACGTTCTCA ATTTCGCTTT GGAACGGGTT TATTTGAAGC AACGGATAAT AACGATCGCA TTCCCGATGG CTATTTTTTC ACTTGGTTGG GTCAAGTTCA ACGATTACAA GTGATTAATC CGGATAATGT TTTAATTATT CAACTCGATT TACAGTTAAC GCCGGATACC TTGTTACCTT CAGAACAGTT TGTCATTGGG GGAGCGCAAT CCGTTCGCGG TTATCGTCAA AATGTGATGG CCGGCGATAA TGGAGCGCGG TTTTCTATTG AAGATCGTAT TACCCTCGTC CGGGATGAAC AAGAAAATCC CGTGTTTATC TTAGCTCCTT TTTTTGATTT AGGAGCAATT TGGAATTCTG AAGATAATCC TAATAGAATT GTCGCCAGTC AGACCGTTAT TGCTGGGTTA GGATTAGGGG TAATTTGGCA ACCGATCGAA AAGTTAAATA TTCGACTCGA TTATGCCCCT CCTTTAATGG ATCTCAATAT TCGTCGTGAT AATGTTCAAG ATGATGGATT TTATTTTAGT ATTAATTACG GCTTCTAG
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Protein sequence | MKTIQLQKKR HWQKGVLVSA CLVTMGLISE KTQGLAYAIP GSPDIFRLKN QEKKFSDSIA NFPLNSPEII GQNNNNKTPI LIEKVQVEGS TVFTSEDFAP IIQPIEGKTV TQQQLREVVS AITQLYINEG YLNSRAVLVG ISDGVAVIAI SEGTIGNIEI EGTTRLQNYV RSRIELGIGT PLNARKLEDQ LRLLRSDPLF KNVQATLQPP QEDTPVTPGE EKARSTLVVT VTEADPFAGS VGADNYSPPS IGATRFNLNL LYRNLTGIGD QIATSYRPRF ETWDGTYSLD LAYRAPLNPM DGAITFNALI ERNRVIQGVE NIDLLNIGGN SERYTLDYRQ PLKRTTREEL ALSTGFSYYN GRTFLDDEPF PFGFGPNDQG VTITSVFTFG QEYIRRQRTG AWGVRSQFRF GTGLFEATDN NDRIPDGYFF TWLGQVQRLQ VINPDNVLII QLDLQLTPDT LLPSEQFVIG GAQSVRGYRQ NVMAGDNGAR FSIEDRITLV RDEQENPVFI LAPFFDLGAI WNSEDNPNRI VASQTVIAGL GLGVIWQPIE KLNIRLDYAP PLMDLNIRRD NVQDDGFYFS INYGF
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