Gene PCC7424_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1619 
Symbol 
ID7109619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1786605 
End bp1787573 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID643479885 
Productputative lipid kinase 
Protein accessionYP_002376926 
Protein GI218438597 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00742984 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCGTT CAGCGTATCT AATTTATAAT CCTAGTGCGG GTCAGGGTAA TCCTGACCTA 
GAACTCAAAC TCATTACCAC TCTCTTATCG CCCAAATTTG ACCTTCATGT CGAAAAAACG 
ACAGAAGAGG TGAGTGCAGA TCAACTCGCT CATCAAGCTC TAGAAAAAGG GTTTAAAACC 
GTCATTGCTG CGGGAGGTGA CGGAACAATT TCGGCCACAG CAGGAGTATT AATCAATAGT 
CAAGTGGCTT TTGGTATTTT ACCCTGTGGC ACAGCTAATG CCTTAGCTAC AACTTTAGGT 
ATTCCCCCTT CCGTTGAAGA AGCCTGTCAA ACCATTATAG CGGGTCATAC ACGCATCATT 
GATACAGCCC TATGTAATGG TAAACCCATG CTACTATTAG CGGGAGTCGG GTTTGAAGCG 
GACACGATTG AAGGGACTGA TAAGCAAGCT AAAAAGAATT TTGGGATGTT AGCTTATATC 
TTTTCTGGAC TGAAACAATT AAGAGAATTT GAGCAGTTTG AGACAGCAAT TGAAACTGAT 
GAAAAAGTTA TTAATATTAC AGCCACCGCC GTTACAGTAG CCAATGCTGC CCCGGCTACT 
TCAATTTTAG CCCAAGGCCC CTCAAAAGTG ATTTTTGATG ATGGATTATT AGATGTTACC 
ATCGTTGCGC CGGTAAACCG AGCGAGTGCT GTAACCGCCT CTTATCATTT GTTGCAAACT 
GCTCTACAAA ATGAAGAAGC TCAGAGAGAT GATATTGGTT ATCTTAGAAC TAAATGGGTG 
AAAATTTCCA CCGATCCGGT GCAAAATGTC GTCGTTGATG GGGAAGTTAT TGGTCAAACT 
TCTATTGAAA TTAAATGCGT TCCCCACAGT TTAATTATAT TTGTGCCGGC CACTCGCAAT 
GATTCCCCCG TTGAAAAATT AGACAATTTA CCTAAGTCCC AAATTCAAGC AAAAACAGAA 
GAGAGGTAA
 
Protein sequence
MTRSAYLIYN PSAGQGNPDL ELKLITTLLS PKFDLHVEKT TEEVSADQLA HQALEKGFKT 
VIAAGGDGTI SATAGVLINS QVAFGILPCG TANALATTLG IPPSVEEACQ TIIAGHTRII 
DTALCNGKPM LLLAGVGFEA DTIEGTDKQA KKNFGMLAYI FSGLKQLREF EQFETAIETD 
EKVINITATA VTVANAAPAT SILAQGPSKV IFDDGLLDVT IVAPVNRASA VTASYHLLQT 
ALQNEEAQRD DIGYLRTKWV KISTDPVQNV VVDGEVIGQT SIEIKCVPHS LIIFVPATRN 
DSPVEKLDNL PKSQIQAKTE ER