Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1618 |
Symbol | |
ID | 7109618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1785804 |
End bp | 1786457 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643479884 |
Product | TPR repeat-containing protein |
Protein accession | YP_002376925 |
Protein GI | 218438596 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.00366972 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTTT GGCAAAAAAA GTTTAATCTA TTTTTACCCG CATTGTTAGC TTTATCCATA ACCGCAATCC CCCAAATGGG AAATGCTCAA GACTCTGCTC CCAGTTTAGA AGAACTGATT CAACTGGGAA ATCAAGCCGC CAAAAGCAAA AATTATGCTC AAGCAGAACG GCTGTTTTAT AATGCGGTGA AACTTTATCC CAATTATCCC GCCGCCTATT ACAATTTAGC TAAAGCACTC TATGACCAAG GAAAATTAGA AGAGGCAGAA ACTAACTATA GACGAGCTAT CTTACTTAAT CCTGAATATG CAGAAGCTTA TAATAATTTA GGCAGTGTTT TATCGGATCA AGGAAAATTA GAAGAAGCAA TTATTAACTT TGAAAGAGCG ATTCACTTTA ATCCTCAATA CTCTTTAGCT TATAATAATT TAGGAACGGC ACTCCACGAA CAAGGACATC TAGAAGAAGC TCAGATGCAA TATCAAACGG CGATCGAGCT TGACGATACT AATGCCCTGG CTTATTATAA TCTGGGTTTA GTTTTGAGAG ACCAAGGAAA AACTCAAGAA GCTAAGGCAA ATTTTGACAA AGCGCTTTCA ATTAATCCTA ACCTTCCCGA TCCTGCCCAA TTTAGCAATA AGAAAAAGCA ATAA
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Protein sequence | MKFWQKKFNL FLPALLALSI TAIPQMGNAQ DSAPSLEELI QLGNQAAKSK NYAQAERLFY NAVKLYPNYP AAYYNLAKAL YDQGKLEEAE TNYRRAILLN PEYAEAYNNL GSVLSDQGKL EEAIINFERA IHFNPQYSLA YNNLGTALHE QGHLEEAQMQ YQTAIELDDT NALAYYNLGL VLRDQGKTQE AKANFDKALS INPNLPDPAQ FSNKKKQ
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