Gene PCC7424_1615 details

Gene Information

• Locus tag: PCC7424_1615
• ID: 7109615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 1783151
• End bp: 1783828
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643479881
• Product: phage shock protein A, PspA
• Protein accession: YP_002376922
• Protein GI: 218438593
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.00247029
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGGCTGGC TAGAGCATCT CGGACGAGCC GTTCGTGCTA ATATTAACAG TTTGATACAG 
GAAGCTGAAG ATCCCGAAAA AATTCTCGAA GAGATGATTT TAAATCTCGA ACAAGAGTTA 
ATCCGAATGC GTCAAGGGTT AGCTGAAGCG ATCGCAACTC TTAAACGCAC AGAACGAGAA 
TCTCAGAAAC ATTACTCTCT GGCTCAAACT TGGCACGATC GCGCTCAATT GGCGTTAACT 
CAAAATAATG AAACTCTAGC TCGTCAAGCC CTTTTTAAAT GGCAAAATTA TCAACATCAG 
GCTGAAACGG TTCAAAATCA ACTAGAACCC CACCGTCAAA TTATTAATAA ACTGAAAAAA 
GAGTTACTCG AATTAGAGAA AAAATATACA GAAGCTAAAG CCAAAAAAAG TCTTTATTTA 
GCCAGATTAC GAGCGGCGAT GGCCTCTAAA AAAATGAATG AAATTCTGGG AAATTTCAAT 
AATGGCAGTG CTTCAACCGT ATTTGAACGG ATAGAAACCA AAATATTAGA ATTAGAATCT 
CATTCGGAAT TAATGTCCAC TGATGATCCC TTAGAACGTC AATTTAGTGC CCTCGAAGGA 
GATAAAAAAA TCGAAGCAGA ATTAATCAAA ATGAAAGCTC AACAGGGAGG AGGACAAGAC 
AAGACGGAAA AATACTAA 

 

Protein sequence

MGWLEHLGRA VRANINSLIQ EAEDPEKILE EMILNLEQEL IRMRQGLAEA IATLKRTERE 
SQKHYSLAQT WHDRAQLALT QNNETLARQA LFKWQNYQHQ AETVQNQLEP HRQIINKLKK 
ELLELEKKYT EAKAKKSLYL ARLRAAMASK KMNEILGNFN NGSASTVFER IETKILELES 
HSELMSTDDP LERQFSALEG DKKIEAELIK MKAQQGGGQD KTEKY