| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1608 |
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| Symbol | |
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| ID | 7109608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1774557 |
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| End bp | 1777604 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643479874 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002376915 |
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| Protein GI | 218438586 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00363686 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTTC AGTATGACCG CCGTTTGCTC AACTCCCTGA AAATAGGGTC ACGAATTATT
AGTATTATCG TCATCCTTGT CGGGTGTACT GTTTTGGTGG GATGGTACTA CGACATTCAA
GTCCTCAAAT CTGTTATGCC AGGATGGGTG ACAATGAAAG CTAATACCGC TCTAGGCTTC
GTCCTGTCGG GTTTATCGTT GTATTTTCTA CAGTCTTCAA ACTACAGGAA ACAGCAACTT
TCTCAAGGGT TAGCTCTCAT CGTATTTTTG TTAGGATTAC TCACATCGAG TCAATATTTA
TTCGGCTGGA ATTTGGGAAT TGATCAGCTA TTATTTAAGG AAGAATTAAA ACAATCAGTC
CTTTCTAAGC CGGGTCGTAT GGCCCCTGAA ACCGCACTGA ATTATATTTT TATGGGTTCG
GCTTTATGGG TATTAGCAAT TAAACCGGTT CGTTTTCGGC TGGTTCAATT ACTGATATCA
ATTACGTCCA TTATATCTAT ACAAGTTCTG GTGGGTTACA TTTATCAAGT CAAACCTCTT
GTTGGTTTAG CGAGTAATAA TCAGGTCGCC ATTCATACGA GTATATTATT TTTGTTGCTG
TGCGTGGGAA TATTATGTGC TAATCCCTGT AAAGGATGGA TGAGGCTGAT CGCCAGCAAT
AGCGCCGGTG GAATTATCGC CCGATCGCTA CTTCCGGCAG CCTTTATTCT TCCCTTGGGG
TTAGGATGGT TAGTAGAAGG GTCAGGATGG ATGGATGTTG CTTTTGGGCA ATCTTTTCAT
GTGATTGGCA ATATAGTTGT TTTTATTGGA CTAATTTTGT ATTGTGCTAA AGAACTATAT
CGAATGGATC TTCAACGCCA CAGAGCAGAA GAGGCATTAA GATCCGCTTA TGATGACCTA
GATCTCAAAG TTCAAGAACG TACCTCGAAA TTATTTCAAG CTTATGAAAC TTTAGCCGCA
GAAATAGAAG AGAGAAAAAG AGCAGAAGCC GCCCAAAAAG CCAGTCAAAA AAATCTTCAA
ACGTTTATTG ATAACACCAG TGCAGCGATC TATTTAAAAG ATTTACAGGG AAAATTTTTA
TTAGTTAATC GGCAGTTAGA AAAACTCGTC GGACTTAAGC GTGAGCAAAT GATTGGCAAA
ACTGATGGGG ATGTTTTTCC CGAAGACATT GCTGATGCTT TTGTAGTCAA TGATCGGCAG
GTTCTTCAAG CCGGTGAGTC CCTTTCACTA GAAGAACAAA TTATCGTTGA GCGGCAATTA
CGGACTTATC TATCGGTTAA ATTTCCCCTC TATGACCCCA ATGGTTTATT GTATGGGATT
GGTGGGATCT CTACAGATAT TACTGAACGT AAACAAGCAG AAGAAGCGCT CAGACAACAA
GCTAATTTAT TAGATTTAGC TTATGAGGCG ATTTTAGTTC GTGACGGGAA TAATGTGATT
ACCTTCTGGA ATCAGGGAGC AGAGCAACTC TACGGTTGGA AAAAATCCCA AGCCCTTGGC
CAGGTTAGTC ATATTTTATT ACAAACTGAG TTTAATCTGT CCTCTCCCCA CTTTGACGCA
ATTCTCAGAT TAACCGGTCA TTGGGAAGGG GAATTGACTC ATACTCGACA GGACGGGACT
AAAATTATTG TTGAAAGTCG TCAAGTCTTA GTGCAAGATG ATCGAGGTCA AATTAAAGGA
ATTCTAGAAG TTAATCGAGA CATTACTGAG CGTAAACTGG CTCAATTTCA ATTAGAACAT
AACGCTTTAC ATGATGCTTT AACCGAACTC CCCAATCGTC TGTTATTAAT GGAACGAATT
CAAGCCGCCA TTCAACGAGC TAAACGAAAA CCCCATTACC ATTTTGCCCT TCTTTTTATT
GACCTCGATC GCTTCAAAAC GATTAATGAT ACCCTCGGAC ATCTAGTCGG CGATCATCTC
TTAGTGGCGA TCGCTACTCG CTTGCAACAC TGCGTCCGTT CTGGTGATAC AGTGGCTCGT
TTAGGGGGTG ATGAGTTTAT TATTCTCCTG GACGATTTAT TAGAAGAATC TGACGCTTTT
CCGATTACTG AGCGCATTCT GGGGCGAATT AAAGAGCCTC TCGTCATCAA TAACCAACAA
ATACAAACGT CCGCCAGTAT TGGGATTGTT TTTAATCGGG ATGGGAATGA ATCGGAAACC
GATTTGTTAA GAAATGCTGA TTTAGCGATG TATAGTGCCA AAGAACAGGG TAAATCTCGT
TATGCGGTCT TTAATCCGAC TATGCACCTT CGCGCTCACA CCCTCTGGGA AATTGAAAAT
AACCTCCGTA CTGCCCTTGA CGGTCAAGAA TTTCTCCTCC ACTATCAACC CATTTTCTCG
TTAACGACTC AAACTTTAGT CGGGTTTGAA GCGCTAATTC GCTGGCGGCA TCCAGTCCGA
GGATTGATTT CTCCGATGGA TTTTATCCCT GTTGCTGAAG AAACGGGTTT AATTGTTCCC
ATTGGGGAGT GGGTACTACA AGAAGCTTGT CGACAATTAC TCCATTGGCA AGAGCTTAAT
CCGGGGGCTA AGTGTTGTTT CATGAGTATT AATCTTTCCA GTCGCCAATT AGAATCAGGT
AACTTTATCG CTGTAATTGA CCAAATTCTT CAACAAACTC CCTTGTCAGC CAAAAACCTA
AAACTGGAAA TTACAGAAAC TTTATTGATG AAAAATTTAG AGGCCGCATC CGCTTTATTA
TTAGAATTGA AAAACCGAGC GATCGGCGTG AGTATTGATG ATTTTGGAAC GGGTTATTCT
TCTTTAAGTT ATTTATGTCA TTTGCCGGTT GATAGCTTAA AAATCGATCG CTCTTTTGTC
GCTAAAATGG ATAAGGGCAG AGAAAGTTTA CAAGTGATTC AAGCCATTAT TAGTTTAGCC
CACCAGCTAA ATCTCGAAGT GATTGCCGAA GGTATTGAAA CTCAAGACCA TTTAACTCAA
TTGCACCATT TAAAATGTGA GTATGGCCAG GGTTATTTTT TATCAAAACC CTTAGATTCC
GAAAAGGCAA CACAGCTTAT CTGTTCATCC CCTGTTGTCT GTTTATAA
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| Protein sequence | MTVQYDRRLL NSLKIGSRII SIIVILVGCT VLVGWYYDIQ VLKSVMPGWV TMKANTALGF
VLSGLSLYFL QSSNYRKQQL SQGLALIVFL LGLLTSSQYL FGWNLGIDQL LFKEELKQSV
LSKPGRMAPE TALNYIFMGS ALWVLAIKPV RFRLVQLLIS ITSIISIQVL VGYIYQVKPL
VGLASNNQVA IHTSILFLLL CVGILCANPC KGWMRLIASN SAGGIIARSL LPAAFILPLG
LGWLVEGSGW MDVAFGQSFH VIGNIVVFIG LILYCAKELY RMDLQRHRAE EALRSAYDDL
DLKVQERTSK LFQAYETLAA EIEERKRAEA AQKASQKNLQ TFIDNTSAAI YLKDLQGKFL
LVNRQLEKLV GLKREQMIGK TDGDVFPEDI ADAFVVNDRQ VLQAGESLSL EEQIIVERQL
RTYLSVKFPL YDPNGLLYGI GGISTDITER KQAEEALRQQ ANLLDLAYEA ILVRDGNNVI
TFWNQGAEQL YGWKKSQALG QVSHILLQTE FNLSSPHFDA ILRLTGHWEG ELTHTRQDGT
KIIVESRQVL VQDDRGQIKG ILEVNRDITE RKLAQFQLEH NALHDALTEL PNRLLLMERI
QAAIQRAKRK PHYHFALLFI DLDRFKTIND TLGHLVGDHL LVAIATRLQH CVRSGDTVAR
LGGDEFIILL DDLLEESDAF PITERILGRI KEPLVINNQQ IQTSASIGIV FNRDGNESET
DLLRNADLAM YSAKEQGKSR YAVFNPTMHL RAHTLWEIEN NLRTALDGQE FLLHYQPIFS
LTTQTLVGFE ALIRWRHPVR GLISPMDFIP VAEETGLIVP IGEWVLQEAC RQLLHWQELN
PGAKCCFMSI NLSSRQLESG NFIAVIDQIL QQTPLSAKNL KLEITETLLM KNLEAASALL
LELKNRAIGV SIDDFGTGYS SLSYLCHLPV DSLKIDRSFV AKMDKGRESL QVIQAIISLA
HQLNLEVIAE GIETQDHLTQ LHHLKCEYGQ GYFLSKPLDS EKATQLICSS PVVCL
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