Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1587 |
Symbol | |
ID | 7109587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1750739 |
End bp | 1751566 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643479853 |
Product | TIR protein |
Protein accession | YP_002376894 |
Protein GI | 218438565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0118312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACAG ATAGTTCACC TCAAGTTTTT ATTTCCTACG CTTGGAGAGG CGACAGCGAA AAAATCGCTA ATCAACTCGA ACAAGCTTTT CAGAACCAGG GAATTACCAT TATCCGAGAT AAGACGAATT TAGGCTATAA AGGGCTGATT AAGGAATTTA TGGAGCAGAT CGGACAAGGT AAGTGTATTC TGGTTATTAT TAGCGATCGC TATCTCAAAT CCGAAAATTG TATGTTTGAA TTGGTGGAAA TTGCTAAACA CGGCGATTTC TACGATCGCA TTTTTCCGAT TGTTTTGGAA GATGCTAATA TTTATCAGGC GACAGGGCGT TTAAAGTATA TTCAACATTG GGAACAACAA ATCAGTGAAC TTGAATCGGC GATGAAACAA GGAAATCTGG CTAATTTACA AGGCATTACT GATGATCTTA ATCTCTACAC CGAGATTAGA AATAATATTG CTCAGTTGAC TAATCTGCTG AAAAATATGA ATACTCTAAC TCCTAATTTA CATCTTCAAT CCGACTTTAA AGAAATTATA GAAGCAGTGG AAGCCAGATT AGCCCAAGAT CAACCTAAAC CGGCCAAAAA ATCAGCAGAA AATAATTCAT TTAAAACTCG GATGCAGTTA ATGAAAGGGC TTAATGGAAT TCCGTTAGAA CAGTTAGAAA TGATCATGTT TACCTTATCA CCCCCTAGAG GAATTATACC CCCATCTATG ACCACTCAGG GGCAAAGAGT ATCGGCATTT TTAAATTGGG CTGAAGGGGA AGGAGGATGT GGATTAGAAC AAGTGGAAGC GGTACTTAAT GAAGTATTAA ACCCTTAA
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Protein sequence | METDSSPQVF ISYAWRGDSE KIANQLEQAF QNQGITIIRD KTNLGYKGLI KEFMEQIGQG KCILVIISDR YLKSENCMFE LVEIAKHGDF YDRIFPIVLE DANIYQATGR LKYIQHWEQQ ISELESAMKQ GNLANLQGIT DDLNLYTEIR NNIAQLTNLL KNMNTLTPNL HLQSDFKEII EAVEARLAQD QPKPAKKSAE NNSFKTRMQL MKGLNGIPLE QLEMIMFTLS PPRGIIPPSM TTQGQRVSAF LNWAEGEGGC GLEQVEAVLN EVLNP
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