Gene PCC7424_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1563 
Symbol 
ID7110621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1721817 
End bp1722704 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content39% 
IMG OID643479827 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002376870 
Protein GI218438541 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.25531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAG TGTTAATTAC GGGTGCTAGT GGTTTTTTAG GCTGGAATCT TTGCCAAATT 
GCTCAAACGT CCTGGGAAAT TTATGGAACG TATTATTCCC ATGCTATTCA ATCCCCAAAT 
GTTAATTTTT TAAAAGTTGA CTTGACAGAT TTTAATAATC TTAAACAACT TTTTGCTGAT 
GTCAACCCCA CTGGGGTCAT TCATCTGGCG GCTCAATCTA AACCTAATTT TTGTCAACAG 
TATCCTGAAC CCTCTTATTT AATTAATGTA ACGACTTCGT TAAATATTGC GGGTTTATGT 
GCGGATTATG ATATTCCCTG TGTTTTTACC TCTACTGATC TAGTTTTTGA TGGATTAAAT 
CCACCTTACA AAGAAACTGA TCCGGTTTCC CCTATTAGTT ATTATGGAGA ACAAAAAGTT 
CTGGCTGAAC AGGGAATGTT ACAACGGTAT CCTAAGACCG TAATTTGTAG AATGCCGTTA 
ATGTTCGGCT TCCCGTCTCC TGTGGCGGAT AGTTTTATTC AATCTTTTCT TACAACTCTG 
CAACAAGGAA AAGAGTTAAA GTTATTTATC GATGAGTGGA GAACTCCAGT CAGTGGCTCA 
ACGGCAGCAA AAGGACTGTT ATTAGCCTTA GAAAAAGGAG AGAGAATACT CCATTTAGGG 
GGAAAAGAGA GGATTTCTCG TTATGAATTT GGGGGGTTAA TGGCAGAGGT TTTACAACTG 
AAAACAGAGC TAATTAAGCC TTGTTCCCAG AAAGATGTGA TTATGGCTGC TCCTCGACCG 
ACTGATGTTT CTTTAGATAG TTCCAAGGCT TTCGCGTTAG GATATGAGCC GTTATCGCTA 
CGGGAAGAAT TGCAACAATT AAAGAGCTTG GTTGGGGAAA ATATGTAG
 
Protein sequence
MNRVLITGAS GFLGWNLCQI AQTSWEIYGT YYSHAIQSPN VNFLKVDLTD FNNLKQLFAD 
VNPTGVIHLA AQSKPNFCQQ YPEPSYLINV TTSLNIAGLC ADYDIPCVFT STDLVFDGLN 
PPYKETDPVS PISYYGEQKV LAEQGMLQRY PKTVICRMPL MFGFPSPVAD SFIQSFLTTL 
QQGKELKLFI DEWRTPVSGS TAAKGLLLAL EKGERILHLG GKERISRYEF GGLMAEVLQL 
KTELIKPCSQ KDVIMAAPRP TDVSLDSSKA FALGYEPLSL REELQQLKSL VGENM