Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1548 |
Symbol | |
ID | 7110605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1708840 |
End bp | 1709358 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643479812 |
Product | pentapeptide repeat protein |
Protein accession | YP_002376856 |
Protein GI | 218438527 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.105882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA ATCGGTGGCA TTCTTTAGTC ATTTCTCGTC TTGTCGTTAG TGTAGTAATC TTTTTAATAG GGTCAATGGT TTGTTTCTCT ACCATGATTA AACCCGTTTG GGCACTCGAT TATGCACAAC GAAATTTAGT AGAAAGTGAT TTTTCCGGTC AAGATTTGCG GGATGCTAAA TTTGATCATG CTAATCTCCG CAGTAGTAAT TTTAGTAATG TCAATGCAGA AGGGGTGCGT TTTTTTGCGG CCAATTTGGA ATCAGCTAAT TTTGAAGGAG CAAATTTAAG ATATGCTGAT TTAGAATCTG CTCGTTTAAC TAGAGTCAAT TTTACTAATG CGGTGTTAGA AGGTGCTTTT GCTACCAATA CTCTTTTTAA AGGGGCAATT ATTGACGGGG CAGATTTTAC CGATGTTTTA TTACGTCCAG ATACAGAACA ATATTTATGT ACTATTGCTA AAGGAACGAA TCCAGTAACA GGACGTAATA CTAAAGATAC TTTATATTGT CCAGATTAA
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Protein sequence | MNMNRWHSLV ISRLVVSVVI FLIGSMVCFS TMIKPVWALD YAQRNLVESD FSGQDLRDAK FDHANLRSSN FSNVNAEGVR FFAANLESAN FEGANLRYAD LESARLTRVN FTNAVLEGAF ATNTLFKGAI IDGADFTDVL LRPDTEQYLC TIAKGTNPVT GRNTKDTLYC PD
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