Gene PCC7424_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1548 
Symbol 
ID7110605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1708840 
End bp1709358 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content36% 
IMG OID643479812 
Productpentapeptide repeat protein 
Protein accessionYP_002376856 
Protein GI218438527 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.105882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGA ATCGGTGGCA TTCTTTAGTC ATTTCTCGTC TTGTCGTTAG TGTAGTAATC 
TTTTTAATAG GGTCAATGGT TTGTTTCTCT ACCATGATTA AACCCGTTTG GGCACTCGAT
TATGCACAAC GAAATTTAGT AGAAAGTGAT TTTTCCGGTC AAGATTTGCG GGATGCTAAA
TTTGATCATG CTAATCTCCG CAGTAGTAAT TTTAGTAATG TCAATGCAGA AGGGGTGCGT
TTTTTTGCGG CCAATTTGGA ATCAGCTAAT TTTGAAGGAG CAAATTTAAG ATATGCTGAT
TTAGAATCTG CTCGTTTAAC TAGAGTCAAT TTTACTAATG CGGTGTTAGA AGGTGCTTTT
GCTACCAATA CTCTTTTTAA AGGGGCAATT ATTGACGGGG CAGATTTTAC CGATGTTTTA
TTACGTCCAG ATACAGAACA ATATTTATGT ACTATTGCTA AAGGAACGAA TCCAGTAACA
GGACGTAATA CTAAAGATAC TTTATATTGT CCAGATTAA
 
Protein sequence
MNMNRWHSLV ISRLVVSVVI FLIGSMVCFS TMIKPVWALD YAQRNLVESD FSGQDLRDAK 
FDHANLRSSN FSNVNAEGVR FFAANLESAN FEGANLRYAD LESARLTRVN FTNAVLEGAF
ATNTLFKGAI IDGADFTDVL LRPDTEQYLC TIAKGTNPVT GRNTKDTLYC PD