| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1515 |
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| Symbol | |
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| ID | 7110572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1671333 |
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| End bp | 1672253 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643479780 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002376824 |
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| Protein GI | 218438495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0647442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATTC ACTTAGAAGT TGAACAAGGA AAACTTAGAC TCGATCGGTG GTTAGCCCAA
AAGCTACCAG ATTTATCTCG TTCCCGACTT CAGACATTAA TTGAACAAGG AAACTTACAG
CTTAATGGGA CAATCTGCAC TGACAAAAAA ACCCTAGTCA AATCCGGCGA TCGCCTACAT
TTGTTGATTC CTCCCGTAAA ACCTCTCGAT CTACAACCCC AAGACATTCC TTTAGATATT
CTCTACGAAG ATGACCAACT TATTATTATT AATAAACCGG CGGGTTTAGT CGTTCATCCC
TCCCCCGGTC ATGAACAAGG CACATTAGTT AATGCTTTAT TGTCCCATTG TTCTAATTTA
GCCGGTATTG GAGGAGTTCA ACGCCCCGGT ATTGTTCACC GTTTAGATAA AGACACAACC
GGCGCTTTAG TCGTTGCTAA AACGGATTAT GCCCATCACC ATTTACAACA GCAATTGAAA
GCAAAAACTG CCAGACGGGA ATATTTAGGG ATAGTCTATG GAGTCCCTAA AACCACGAGT
GGCAAGATTA ATCTTTCTAT TGGTCGTCAT CCTATAGAAC GCAAAAAGAT GGCAGTTGTT
CCCCTAGAAA AAGGAGGACG AGAAGCAATC ACTCATTGGG AAATTTTAGA AAGATTAGGA
AATTACTCTT TAATCTATTT TCGCTTAGAA ACGGGAAGAA CTCATCAAAT TCGGGTACAT
TGTCAGGCAA TGAATCACCC TATTGTAGGA GATCCGGTCT ATAGTTCCGG TCGATCTATC
GGCGTTAACT TAGCCGGACA AGCACTTCAT GCGTGGAAAT TAACCCTCGA ACATCCCCTA
TCCGGTGAAA TTATCGAAAC GATCGCACCT TTACCCAGTA CATTTACTAA GCTTCTAGAG
GTTCTCCGTT CACGCCAATA A
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| Protein sequence | MEIHLEVEQG KLRLDRWLAQ KLPDLSRSRL QTLIEQGNLQ LNGTICTDKK TLVKSGDRLH
LLIPPVKPLD LQPQDIPLDI LYEDDQLIII NKPAGLVVHP SPGHEQGTLV NALLSHCSNL
AGIGGVQRPG IVHRLDKDTT GALVVAKTDY AHHHLQQQLK AKTARREYLG IVYGVPKTTS
GKINLSIGRH PIERKKMAVV PLEKGGREAI THWEILERLG NYSLIYFRLE TGRTHQIRVH
CQAMNHPIVG DPVYSSGRSI GVNLAGQALH AWKLTLEHPL SGEIIETIAP LPSTFTKLLE
VLRSRQ
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