Gene PCC7424_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1486 
Symbol 
ID7108423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1635176 
End bp1635718 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID643479751 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002376795 
Protein GI218438466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00000139757 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTTA TTCCGACGGA AATACCAGAC GTTTTGATCA TAGAACCTAA AGTCTTCGGG 
GACGATCGAG GTTTTTTTTA TGAAAGTTTC ACCGAAAAAG TCTTTAAAGA CAAAACAGAA 
GTAGACACTC ATTTTGTCCA AGACAATCAT TCCCGTTCCC TCAAAAACGT CTTGAGAGGT 
TTACATTATC AAATTAAACA ACCTCAAGGA AAATTAGTAA GAGTTGTACT CGGAGAAGTG 
TTTGATGTTG CCGTCGATAT CCGTTCTAAC TCTCCGACGT TTGGGCAATG GGTCGGCTGT 
AGATTAAGTG CTGAAAATAA GCGTCAATTG TGGGTTCCCG AAGGATTTGC TCACGGGTTT 
TTAGTTCTAT CAGAGGCAGC AGAATTTTTA TATAAAACTA CTGATTACTA TGCCCCAGAA 
TATGAGAGAA CCATTATTTG GAATGACCCC GATATAGGGA TTGATTGGCC GATTGAAGAC 
GAACCGATTC TATCAAATAA GGATCAAGCC GGCAAACTCT TTAAAGAAGC GGATGTCTTT 
TAA
 
Protein sequence
MKVIPTEIPD VLIIEPKVFG DDRGFFYESF TEKVFKDKTE VDTHFVQDNH SRSLKNVLRG 
LHYQIKQPQG KLVRVVLGEV FDVAVDIRSN SPTFGQWVGC RLSAENKRQL WVPEGFAHGF 
LVLSEAAEFL YKTTDYYAPE YERTIIWNDP DIGIDWPIED EPILSNKDQA GKLFKEADVF