Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1480 |
Symbol | |
ID | 7108417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1629623 |
End bp | 1630507 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643479745 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002376789 |
Protein GI | 218438460 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.000191498 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATAAAT TTGAAAGTCT AAGAGCATTT ACAGAAGTCA TCAAGGGGGG AGGGTTTGCC GCAGCCGCGC GACAGATGAA TTTATCTCGC TCAATGGTGA GTAAGTTGGT GATGAATTTA GAAAATGACT TAGGAGTACA ATTACTGCTC CGCACTACCC GGCGCGTCAC TCCTACCCCT ACCGGTTCGG CGTTTTATGA GCGTTGCGTG ACTATTTTGG CGGAGTTGGA AGAGGCTCAA TTAGCGGTTT CTCAACTTCA CACAGAACCT AAAGGTCTTC TTAAAGTTAA TGCGCCGATG TCTTTTGGGA CTTTACATTT AGCACCGGCG ATCGCGGATT TTATGTTAAG ATATCCTGAT TTACAAGTAC AATTAACCTT AGAAGATCGC TTTATTGATC CGGTTGCTGA AGGGTTTGAT GTGACGGTTA GAATCTGTAA ACCGTTTAAG GCAGCAGGGT TAATTGTTCA TCCTTTAATG AAGGTTAAAC AGGTTCTTTG TGCTGCCCCC AGTTATTTAA AAAAAAGGGG AACTCCTACC CATCCCCACC ATTTACGGGA GCATTCTTGT TTACATTATG GTTATTTTTC TACTGGCAAT CAATGGACGT TATCGGGGGC GGAGGGAGAC TATACAATTG CTATTAGTGG GGCGTTAAGT TCTAATAATG GTGAGGCTCT TAAATGGGCA GGAATTAAGG GTTTAGGTGT TGTTTTTTTG CCGACTTTTA TTGTTGGGGA TGAGTTAAAA CAAGGGTCTT TGGTAGAGGT TTTATCGGAT TATTCTGTAG GAGAACTTTC TGTTTATGTG GTTTATCCGA CTAATCGTCA TCTTTCTCTT AAAATTCAGT TGTTGACTGA GTTTTTAAGG GGGGTTTTTG CGTAG
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Protein sequence | MDKFESLRAF TEVIKGGGFA AAARQMNLSR SMVSKLVMNL ENDLGVQLLL RTTRRVTPTP TGSAFYERCV TILAELEEAQ LAVSQLHTEP KGLLKVNAPM SFGTLHLAPA IADFMLRYPD LQVQLTLEDR FIDPVAEGFD VTVRICKPFK AAGLIVHPLM KVKQVLCAAP SYLKKRGTPT HPHHLREHSC LHYGYFSTGN QWTLSGAEGD YTIAISGALS SNNGEALKWA GIKGLGVVFL PTFIVGDELK QGSLVEVLSD YSVGELSVYV VYPTNRHLSL KIQLLTEFLR GVFA
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