Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1478 |
Symbol | |
ID | 7108415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1627841 |
End bp | 1628632 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643479743 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_002376787 |
Protein GI | 218438458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00167638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGAAG ACTCAGCGAT TCCACTTAGA AAACAGCAAT CTATTTTACA AAAAGAGATT AAAGTTGATG TCAAGAGCTT AGTATTTTCA CTGACAAAAG CAGGAATTAA TTTAGGGTTT GGGAAATGGG ATGACCTGGC TGAAAATGGG ATAGACATTT TAGAATCATT GGGACTAGAC AAAAAACCGG CAGAAGTTGC CGGGTTATTA ATTATTCGCT CAATAATGCA AGGAATAGGA GAATTATTAA AAGATCATCA AGATTTATTC AACAAAACTT TAGAAAAAAA TGATGAAAAA GAATTTTATC AAACTTTAAA TACATTTTTA GATAATAATG AAATAATTAT CGATCGAGAT TTTTTTGAAC GTCCTCAAAA TTTACCCTTA TTAGAAAAAG TTCAAAAGGG TTTTGCTAAG TGGTTAGAGT TATTTCTTGA TAAAGCGGTT GATGCAGAAA ATATCAGTCA TCGTCTTCCG AGTTATTTTA TTTTCGCCTT AAATAAAGAA TGGCTAGAAA ATTCTAAAGA GTATGCTAGT CTCAAAGAAG AATTAGAGAC TCCTTTCACC TCAGCAACGA AACGGGAAAT AAGATGGTTA AAATATCGTC CTTGGTTACA AAAACAAGTT GATGAACCGG TCTTTTTAGA AACCTTTAGT TTAAAACAAA TTTATATTCC TTTGCGTGGA TATTATGAGC AAGCAGAAAA AGATAATAAT TTGACTCGTA ATGCTGCCAA TTTAGTAAGA GAAGATTTTG ATTTCAAATG TTATCTGGTT CTTCAGCAAT AA
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Protein sequence | MLEDSAIPLR KQQSILQKEI KVDVKSLVFS LTKAGINLGF GKWDDLAENG IDILESLGLD KKPAEVAGLL IIRSIMQGIG ELLKDHQDLF NKTLEKNDEK EFYQTLNTFL DNNEIIIDRD FFERPQNLPL LEKVQKGFAK WLELFLDKAV DAENISHRLP SYFIFALNKE WLENSKEYAS LKEELETPFT SATKREIRWL KYRPWLQKQV DEPVFLETFS LKQIYIPLRG YYEQAEKDNN LTRNAANLVR EDFDFKCYLV LQQ
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