Gene PCC7424_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1328 
Symbol 
ID7108827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1462254 
End bp1464200 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content35% 
IMG OID643479594 
Productdiguanylate cyclase 
Protein accessionYP_002376641 
Protein GI218438312 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG ATGAAATAAT ACAACTTTTT AGTGCCACCC ACAGCAAAAA GCTGTCTCCT 
TTGGAAAAGC AGATTTTGCA TAAAGCGTGG CAAGGACAAA CCTATGCTCA AATTGCTCAT
TCTTTGTATT ATCAAGAAAC TTACATTAAA AATTTAGCTT CTCATCTGTG GAATGAGCTT
TCGGGATTAT TTAACGAAAC AATTTCTAAG AATACTTTTC AAGCTAAATT AAAACAACGT
TCTTTAACCC TCCAAGAACA ACAATTATTA TCACAAGCAA GTCATCCAAT TTTACTTAAT
GAGGGGTGGG AATTTCCCTG TGGATTAGTG CCTTTAAATT CTCCCCTTTA TATTGAACGT
CCTCCCCTTG AAGAACTCGC CTATAGAGAA CTACAAAAAC CGGGCTGTTT AATTCGCATT
AAAGCTCCTT CTAAAATGGG AAAAAGTTCT TTATTAGTTA GGATTTTAGA CTCGGGAAAA
ACTCTGGGTT ATCAACTTGT GAATTTAGAT TTGAAAAAAG CCGAAAAAGA TATTTTTCAA
GATCTAAATA AATTTTTACA GTGGGTATGT GCTAATGTCA CCCAGCAATT AGGAATTAAA
ACCACTGTAG AAGAGCATTG GAATACAGAG ATTGGCAGCA ATACTAACTG CACTTTCTAT
TTTCATAATG TAATTCTTCC CCATCTTGAT AAACCTTTAG TTTTAGCCTT AAATGAATTA
GAGCGTCTTT TTGAATATTC CTCTCTTACC CAAGACTTTT TATCCTTACT TCGATTTTGG
TATGAACAGG GGAAACAAAG CATTATTTGG GGCAAACTAC GTCTAATATT AGTTCATAGT
ACAGAAGTTT ATATTCCTTT AGGAATTAAT CAATCTCCCT TAAATGTAGG ACTTCCCATT
ACCTTACCCG AATTTACCCT TGAGCAAGTA CAGGATTTAG CCTTGCGACA TGGCTTAAAT
TGGCAAGAAA AACAGGGATT AAACAAGGTA AAATCCCTCA TGGATATGGT AGGGGGACAT
CCCTATCTAA TTCGATTAGC TCTATATCAT TTAGTCAATA ATCCTCAACA AGATTTAGAG
CAATTATTAA AGCAAGCACC TACCCAAATG GGAATTTACA GCGATTATTT ACAAGGTTTG
TTAGTCATTT TACAAACCTC TCCTGAATTA GTCACTGCTT TGAAACAAGT TATCACCAAT
TCTCAACCCG TGCAACTGAA AGCGATGACT TTACATAAAT TAATGAGCAT GGGATTAGTT
AAATCCGAAG GCGATCATAT TATTCCGAGT TGTCAATTAT ACAATTTATA TTTTCAGGAA
CAATTGATCA AAACCGAGCG TTCAGAAATA GAAAAATTAC AACATGAGAA TGAAATTCTT
AAACAGTTAT GTTCCACAGA CGAACTAACC CACTTGGCTA ACCGTCGTTA TTTTAATGAA
GTATTAGACA AGGAATGGCG ACGTTTAGCG AGGACATTTG GCCCCTTATC TTTGATTTTG
TGTGATGTCG ATTTTTTCAA AGCTTACAAT GATACTTATG GTCATTTAGC GGGAGATTTT
TGCTTACAAG AAATTGCTAA AACCATTTAT CATTGTACTT ATCGTCCTTG CGATCTAGTT
GCCCGTTATG GAGGAGAAGA ATTTGCTATT ATTTTACCTG AAACGGATTC TGCGGGAGCT
ATGATAGTCG CGGAAAAAAT TCGATTATCA GTTAAAGAGT TAGCAATTTC TCAGGGGAAA
ATTAGCCCCA AAATTGACCT AAATGAGCAA AATATTCTGA CGGTTAGTTT GGGGGTTGCT
TGTACGATTC CTAATCGGAG AATTGATATC AATTTATTAA TTAAGGCAGC CGATAACGCC
CTCTATGAAT CCAAACAAAA TGGACGCGAT CGTGTAACTG TAAGTTCGAT CTTAAATTAT
CACTCTCAAT ATCAACTGAA TCCATAA
 
Protein sequence
MTIDEIIQLF SATHSKKLSP LEKQILHKAW QGQTYAQIAH SLYYQETYIK NLASHLWNEL 
SGLFNETISK NTFQAKLKQR SLTLQEQQLL SQASHPILLN EGWEFPCGLV PLNSPLYIER
PPLEELAYRE LQKPGCLIRI KAPSKMGKSS LLVRILDSGK TLGYQLVNLD LKKAEKDIFQ
DLNKFLQWVC ANVTQQLGIK TTVEEHWNTE IGSNTNCTFY FHNVILPHLD KPLVLALNEL
ERLFEYSSLT QDFLSLLRFW YEQGKQSIIW GKLRLILVHS TEVYIPLGIN QSPLNVGLPI
TLPEFTLEQV QDLALRHGLN WQEKQGLNKV KSLMDMVGGH PYLIRLALYH LVNNPQQDLE
QLLKQAPTQM GIYSDYLQGL LVILQTSPEL VTALKQVITN SQPVQLKAMT LHKLMSMGLV
KSEGDHIIPS CQLYNLYFQE QLIKTERSEI EKLQHENEIL KQLCSTDELT HLANRRYFNE
VLDKEWRRLA RTFGPLSLIL CDVDFFKAYN DTYGHLAGDF CLQEIAKTIY HCTYRPCDLV
ARYGGEEFAI ILPETDSAGA MIVAEKIRLS VKELAISQGK ISPKIDLNEQ NILTVSLGVA
CTIPNRRIDI NLLIKAADNA LYESKQNGRD RVTVSSILNY HSQYQLNP