| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1286 |
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| Symbol | |
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| ID | 7108784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1422872 |
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| End bp | 1424992 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643479553 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002376601 |
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| Protein GI | 218438272 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.780244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA TCATTGATCT ATATTTGAAA GACTTGCTAT CTCAATATTT TCTGAGTATT
TCAGAAGATA CTATCAGTCT TCAAAAAATT GAAAATGGGA TAAAACAAAG TCAAGCTCAA
CTCAAAAGTA TTTTAGACAG TTTAAAAGAC ATTGTCTGGT CAGTATCTCT ACCGTCTTTT
CAATACATTT ACCTTAATAA AACAGCCGAA GATATTTATG GGATTAGTAT CAGCGAATTT
TTCAAAAATT CTAATCTTTG GTTAGAGATG GTTCATCCAG AAGATCGCTC CAACATTAAG
CAATTGGCTA GAAATTGGGA TCAATCAGAC ATCAATAAAG ATATAGAATA TCGTATTATT
CGCCCTGATG GGCAGATTCG CTGGTTACAT AATCGGATTC AAGTCATCTA TAATGAACAA
AAAAAACCCG TTCGTCTTGA TGGAATTATT ACGGATATTA CGGAACGAAA AAAAACAGAA
ATCGCTTTAC AACAAAGTGA ACATCGTCTA AGCCAAATTA TTACTACTAT TTCTGATGGG
TTGATTGTTG TTGATTACGA AGGTACAGTT AAATTTGTTA ATGCTGCCAC TGAAAAACTA
TTTGGACGAA CAAAACAAGA ATTGATAGAC CAAAAATTGG GAATTCCTTT TGTCGATGGA
GATAGAACAG AAATTTATAT TCGTCATAGC AACGGACACC TGATTATCGC AGAAATACGA
ATTAGTGAAA TTACTTGGAA ACAAGAAAAT GCTTATCTAA TTTCTCTAAG AGATATCACT
GACCGTAAAT ACATTACTGA CCAACTCCAA TACCATGCTA CTCATGATCC TTTGACCGAT
TTATTCAATC GAAACTTTTT GCTAGAAAAA TTACAAAACC TCCTCGAAAA AAATAAAAAT
CAATCCGGAA AATCTTTTGC AATTTTATTT CTTGACCTTG ATGATTTTAA AGTCGTTAAT
GATAGTTTAG GTCACTTAGC TGGAGATCAA CTCTTAATCA TGATTACTAA ACGACTACAA
AACAGTCTAG GTCAAAATCA TACCTTAGCC CGTTTTGGAG GGGATGAATT TACCATCCTT
CTAGAAAATA TTAAAGAAAC CCAAGATGCC ATTATAGCTG CCCAGAAAAT TCATTCTAAT
TTAACTTATC CCTATAATCT TAACGGTCAA CAAATATTTA TTAATACCAG TATTGGTATA
GCTCTTAGCT CTCCTGATTA TACTCATCCT TACGAAATTT TGCGAGATGC AGATATAGCC
ATGTATCAGT CAAAAAAACA AGGGAAAGGA GCTTGTACTC TGTTTAACCA ACAAATGCAC
GAACAAGCGG TTAAACGATT ACAAATGGAG ATAGAACTGC GACAAGCTAT CGAACAACAA
GAATTTATTG CCCACTATCA ACCTATTTTT TCTTTAACCA CAGGGAAGTT AATCGGATTT
GAAGCTTTGA TTCGATGGCA ACATTCTCAA AAAGGATTAA TCTCTCCGGC TGAATTTATT
CCCATTGCCG AAGAAACAGG CTTAATTGTT CCTATGGGAA AATGGATTCT TTTAGAAGCT
TGTACTCAAC TCAAACAGTG GCAAGAGCAA TATGATCATG AACATATTTT GCAAATTAGC
GTCAATCTTT CTAGCAAGCA ACTTCGAGAC CCTTATTTAG TACAAGAAAT TGATAAAATA
TTAACCCACA CCGAAATCAA CCCCCAAAAT CTAAAAATAG AGATTACAGA AAGTCTGTTA
ATGGAAAATT TTGATACAGC TATGAATATC TTACTCCAAC TCCAGGAGCG CAATACACAA
TTATGTCTCG ATGATTTCGG AACGGGTTAT TCATCTTTAA GTTATTTACA TCGTTTTCCC
GTTGACATCC TTAAGATAGA TCGTTCTTTT GTGATGCAAA TGCACTCCGG AAATAACAAC
TTAGAAATTA TTCGTACTAT CATTACTCTA GCTCATAGTT TAAATATGAG GGTGATTGCA
GAAGGGATTG AAACTGAGTC TCAATTATCT CAACTTAAAT CCCTTAATTG TGAACAGGGA
CAAGGGTATT TATTCTCTAA ACCTGTTCCT CAAGAAGTGG CAGAATCTTT AATTAAAGAG
TCTTTATATT CTGCTTTATG A
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| Protein sequence | MTEIIDLYLK DLLSQYFLSI SEDTISLQKI ENGIKQSQAQ LKSILDSLKD IVWSVSLPSF
QYIYLNKTAE DIYGISISEF FKNSNLWLEM VHPEDRSNIK QLARNWDQSD INKDIEYRII
RPDGQIRWLH NRIQVIYNEQ KKPVRLDGII TDITERKKTE IALQQSEHRL SQIITTISDG
LIVVDYEGTV KFVNAATEKL FGRTKQELID QKLGIPFVDG DRTEIYIRHS NGHLIIAEIR
ISEITWKQEN AYLISLRDIT DRKYITDQLQ YHATHDPLTD LFNRNFLLEK LQNLLEKNKN
QSGKSFAILF LDLDDFKVVN DSLGHLAGDQ LLIMITKRLQ NSLGQNHTLA RFGGDEFTIL
LENIKETQDA IIAAQKIHSN LTYPYNLNGQ QIFINTSIGI ALSSPDYTHP YEILRDADIA
MYQSKKQGKG ACTLFNQQMH EQAVKRLQME IELRQAIEQQ EFIAHYQPIF SLTTGKLIGF
EALIRWQHSQ KGLISPAEFI PIAEETGLIV PMGKWILLEA CTQLKQWQEQ YDHEHILQIS
VNLSSKQLRD PYLVQEIDKI LTHTEINPQN LKIEITESLL MENFDTAMNI LLQLQERNTQ
LCLDDFGTGY SSLSYLHRFP VDILKIDRSF VMQMHSGNNN LEIIRTIITL AHSLNMRVIA
EGIETESQLS QLKSLNCEQG QGYLFSKPVP QEVAESLIKE SLYSAL
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