Gene PCC7424_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1239 
Symbol 
ID7109785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1363914 
End bp1364732 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content35% 
IMG OID643479507 
ProductABC-2 type transporter 
Protein accessionYP_002376555 
Protein GI218438226 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAA CCCTAAAAGC TACTACTAAG GCTAAATTTG GCTGCTCATC TATTCAACGA 
TATTATGAGT TAATTCATGT TTTGGTTGAG CGCAATATAA AAGGACGATA TCGCGGTTCA
TTCTTAGGGG TCTACTGGTC TATGTTGAAC CCTTTAATTA TGACTGGTAT ATATACTTCA
ATTTTTGGAA CTATTTTTGC TTCTTATTAT GATAATTCTA TAGTCAATTA TGTTTTAGCG
GCTTTTACTG GGTTGGTAGT GATCAACTTC TTTAGTGCTT CTACTACTCA AGCTCTATCA
AGTGTCGTAA GCAATGGGGG ATTACTGAAT AAATTGAAGC TTCCCATCAG TATATTCCCG
GTTTCTATGG TGATTGCTAA TGTTTTTCAG TTATTAATCG GAGCTTTACC GATCTTAGCA
GTTGTTACTT TATGGAATTC TAAAAGTTTG ATTAATTTAG GAGCTTTATT ATTTCCTTTA
ATCGCTTTAA CTTTACTATC TACAGGGATA GGGTTTATTG TTTGCACTCT GTATGTGTTT
TTTAGAGATT TACCCTATTT TTATGAAATA ATCTGTTTTG TCTTATGGAT GACCAGCCCG
ATTTTTTATC CGGCTGAGAT TGTTCCAGAA ACGGTAAAAC CTTTTATTAG TTTGAACCCT
CTGCTTCCTA TCATCGAAAG CATTCGTCAA ATCGCTTTAT CTGGAGATTT GCCCAATATT
CATTATATGG GACAAGCTCT AATCAGTGGT TTGATCTTTT TATTTCTAGG TTGGAGTGTT
TTTCGTTGGT TACAAGACCA ATTTATGGAC TTACTGTAA
 
Protein sequence
MTLTLKATTK AKFGCSSIQR YYELIHVLVE RNIKGRYRGS FLGVYWSMLN PLIMTGIYTS 
IFGTIFASYY DNSIVNYVLA AFTGLVVINF FSASTTQALS SVVSNGGLLN KLKLPISIFP
VSMVIANVFQ LLIGALPILA VVTLWNSKSL INLGALLFPL IALTLLSTGI GFIVCTLYVF
FRDLPYFYEI ICFVLWMTSP IFYPAEIVPE TVKPFISLNP LLPIIESIRQ IALSGDLPNI
HYMGQALISG LIFLFLGWSV FRWLQDQFMD LL