Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1234 |
Symbol | |
ID | 7109780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1356016 |
End bp | 1359582 |
Gene Length | 3567 bp |
Protein Length | 1188 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643479502 |
Product | WD-40 repeat protein |
Protein accession | YP_002376550 |
Protein GI | 218438221 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.593825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTG AAAATGGCTT AGAATTAGCA AATGAAGCTG TTTTAAATCG ACTTGGTAGG CAATTGAGCT TAGTTGAGGA GGCAATTTTA AAAGGGTCTT GGGAGGGACA GACTTATGAG GAGATTGCAC AAGCAACGAA TTACTCGGTC GACTACCTCA AACGTCACAT CGGGCCACAG TTATGGAAGC TGCTTTCTGA GGTTTTGGGA GAAAAAGTTA ATAAGACTAA CTTTCGACTC GCCCTCGAAG CGAGACAAGA GAGTGAAAAA CCCCCTAAAA ATGACTCTCA ACTTGACCCT ATAAGTCCTA CAATAACATC TTGTCGATGT GACTGGGGGG AGGCTCTCGA TGTTTCTATA TTTTATGGAC GCATTCAAGA GTTGACTACC CTAAACCAGT GGATAAGAGA ACATCGCTGT CGTTTAGTTG CCTTATTAGG AATGGGTGGC ATTGGCAAAA GCTCTCTTTC TGTCAAACTC GCACAACAAC TTGAGTCTGA ATTTGATTTT ATTATTTGGC GATCGCTGCG TAATGCTCCG TCTTTAAAAA TTCTCTTAGC TGATTTAATT TCAATACTAT CAGAGCAGCA AGAAACCACA GCCAGCATTA AAAGACTCAT TCATTATCTG CGTTCCTATC GTTGTTTAAT TGTTTTGGAT AACTTAGAAA CCCTATTAGA TGCTGTTCGG ATTGGACAGT TTCGAGAAGG GTTTGAAGAT TATGGGGAAT TACTCACAAT AGTAGGAGAA ACGACTCATA TCAGTTGTAT GGTTTTAACT AGCCGAGAAA GACCGGCAGA AATAGCGACC TTTGAAGGGA TAGAATTAGC GGTACGTTCC CTAAAATTAG AGGGATCAAA AGAAGCGGCT TATGCTTTAC TTCAAGCCAA GGGATTATCG GGAACATCAC TCCAACAAGA AAAATTAGGG GAGTGTTATT GTTACAATCC ATTAGCCATA AAAATTGTAG CCACTTCAAT TCAAGATTTA TTTGATGGGG AGATAGGAGA TTTTCTAGAG CAAGAAACGT TTGTTTTTAA TGGGATTCGT CGTCTATTAA AGCAGCAATT TGAACGTCTG TCCCCTTTAG AAAAAGACAT CATGTATTGG TTAGCGATTA ACCGAGAGTG GACGACTCTA TCTGAGTTAC AAAAAGAGCT TGTGCCAAAG ATTAGAAGTA GCCAACTTTT AGAAACCCTT GAAGCTTTAA ATGGGCGATC GTTAATTGAA AAAAAATCAG GTCTTTATAC TCAACAACCC GTCGTAATGG AATTTGTGAG TGAATGCTTA GTTCAAGACA TGGCTCAAGA ACTAATTAAC CAAGAATTTC AATTATTCAA CACTCACGCT TTACTCAAAA CTACGGTTAA AGATTATGTT AGAGAAACTC AAGAGCGATT GCTACTAGAC CCTATTGCTG ACTCATTGCG ATCGCAGTTG GGGTCAATGT TAGCGATCGC TCAATATCTC CAAGATCTAT TAAATGTAAT CCGGCAATCA CAGCATTACT CCCAAAGTTA TGGCCCTGGC AATCTGATTA ATTTGTGTTG CTATCTTCAA TTAGATTTAA CGAGCTATAA CTTATCTAAT TTAACGATTC GGCATGGTTA TTTTCAAGGA ATTAACCTAC ATCAGGTCAA TTTAGCTCAC TCAAATTTGA TCGAGTGTAG ATTTACTCAA ACCTTTGGGG CGATTTATTC GGTTGCTTTT AGTCCAGACG GTCAACTGAT GGCCACCGGT AATAGACATG GAGAGATTTG GCTGTGGCAA ATAGAAGATA GTCAACCTTT GTTTACTTGT AAAGGTCATA CCAATTGGGT TTGGTCAATT GTTTTTAGTA GAAATGGGGA AATTCTCATT AGCGGGAGTA CAGACCAAAC GATTCGACTG TGGAATGTGA GTAACGGTCA ATGCTTAAAG ATTTTATCCC AACATACCAA TGGAGTTTAT GCTATTGCCC TTAGTCCTGA CGGAAATATT CTCGCCAGTG GGGGTGATGA GCAAGTGATC AAGTTTTCGA CCCTTAGTGA GGGTCAACTT CTCAATCTGT CCTTACATCA TAATTGTGGG ATACGCTCAA TTGCCTATAG TCCCGATGGA CGTTTTTTAG CCAGTGGGGG GACAGACCAA ACCGTGAGAA TTTGGGATCT CAGTAAGGGT CAGTGTTTAA AAACCCTCTC AGGACATCTT AATTGGGTTT GGTCAGTTGC TTTTAGTCCC GATGGGCAAT TATTGGCTAG TGGAGGGGAT GATCCAAGGG TGAGAATTTG GGATGTTCAG ACAGGAGAAT GTATAAAAAC CCTTTCAGGA CATTTAACTT CATTGCGTTC AGTCGTTTTT AGTCCAGATG GTCAACGATT AGCCAGTGGG AGTGCGGATC AAACCGTGAG AATTTGGGAT GTTCAGACCG GTCAATGTTT AAAAATTTTG TCTGGACATA CTAATTGGGT CTGGTCAGTG GCCTTTGCTC CTTCAAAAAC CGTCAATAGC TTAACCCCCC AACTTTTAGC CAGTGGGAGT GAAGATAGAA CCATAAGACT TTGGAATATT AATAATGGGG AGTGTCTCAA AACCTTGATC GCCTATGCCA ATAAAGTCTT TTCAGTCGCT TTTCAGGGGG AAAATCCTCA TTTGATCGTC GGGGGTTATG AAGATAATTT AGTACGGGTG TGGAATTGGA GTAATAACGA GTGTCTTAAT TTTAAAGGAC ATACTGATGT CGTTCTTTCC GTCGCTTGCA GTCCCAAGGG GGAGTTAATA GCGAGTAGTG GTGGGGGTTC AGATTGCACG ATTAAACTTT GGAATGTTAC TAGCGGTCAG TGTCTTAGTA CCTTGTCAGG ACACGCTGAG GGAGTTTGGG CAGTGGAATT TAGCCCCAAT GGTTCTCTTT TAGCTAGTGG GGGGACAGAT CAAACGGTAA AATTATGGGA TGTTAAAACG GCTCAGTGTG TTAAAACCTT AGAAGGACAT CAAGGATGGG TCTGGTCAGT GGCTTTTAGC GCAGACGGTA AACTCTTAGG GAGTGGCTGT TTTGACCGAA CTGTTAAACT TTGGGATCTT CAAAGTAGTC AGTGTTTATA TACATTAAAG GGTCATTTGG CTGAGGTGAC TACGGTCGCT TTTAGTCGAG ATAGTCAGTT TATAGCGAGT GGTAGTACCG ATTACAGTAT TATTCTCTGG GATGTGAATA ATGGTCAACC GTTCAAAACT CTGCAAGGAC ATACCAGTAT AGTCATGTCT GTGACTTTCA GTCCGGATGG ACGCTTTTTG GCTAGTGGGA GTTTTGATCA AACGATTAGA ATCTGGGATT TTCTGACGGG TGAGTGTCTT CTGATTTTAC AGGGACATAC TCGCGGTATT GAGTCCGTTG GTTTCAGTCG GGATGGGTGT TTTTTGGTTA GTGGCGGTGA AGATGAAACG ATTAAGCTTT GGCAGGTTCA AACGGGTGAG TGTTTAAAAA CTTTTAAGCC TAAACGACCC TATGAGGGAA TGAATCTTAC TGGAGTGACC GGTTTAACCG AATCTCAGAT CACCTCTCTT TTGGCTTTGG GGGCACTTTC AGATTAG
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Protein sequence | MNFENGLELA NEAVLNRLGR QLSLVEEAIL KGSWEGQTYE EIAQATNYSV DYLKRHIGPQ LWKLLSEVLG EKVNKTNFRL ALEARQESEK PPKNDSQLDP ISPTITSCRC DWGEALDVSI FYGRIQELTT LNQWIREHRC RLVALLGMGG IGKSSLSVKL AQQLESEFDF IIWRSLRNAP SLKILLADLI SILSEQQETT ASIKRLIHYL RSYRCLIVLD NLETLLDAVR IGQFREGFED YGELLTIVGE TTHISCMVLT SRERPAEIAT FEGIELAVRS LKLEGSKEAA YALLQAKGLS GTSLQQEKLG ECYCYNPLAI KIVATSIQDL FDGEIGDFLE QETFVFNGIR RLLKQQFERL SPLEKDIMYW LAINREWTTL SELQKELVPK IRSSQLLETL EALNGRSLIE KKSGLYTQQP VVMEFVSECL VQDMAQELIN QEFQLFNTHA LLKTTVKDYV RETQERLLLD PIADSLRSQL GSMLAIAQYL QDLLNVIRQS QHYSQSYGPG NLINLCCYLQ LDLTSYNLSN LTIRHGYFQG INLHQVNLAH SNLIECRFTQ TFGAIYSVAF SPDGQLMATG NRHGEIWLWQ IEDSQPLFTC KGHTNWVWSI VFSRNGEILI SGSTDQTIRL WNVSNGQCLK ILSQHTNGVY AIALSPDGNI LASGGDEQVI KFSTLSEGQL LNLSLHHNCG IRSIAYSPDG RFLASGGTDQ TVRIWDLSKG QCLKTLSGHL NWVWSVAFSP DGQLLASGGD DPRVRIWDVQ TGECIKTLSG HLTSLRSVVF SPDGQRLASG SADQTVRIWD VQTGQCLKIL SGHTNWVWSV AFAPSKTVNS LTPQLLASGS EDRTIRLWNI NNGECLKTLI AYANKVFSVA FQGENPHLIV GGYEDNLVRV WNWSNNECLN FKGHTDVVLS VACSPKGELI ASSGGGSDCT IKLWNVTSGQ CLSTLSGHAE GVWAVEFSPN GSLLASGGTD QTVKLWDVKT AQCVKTLEGH QGWVWSVAFS ADGKLLGSGC FDRTVKLWDL QSSQCLYTLK GHLAEVTTVA FSRDSQFIAS GSTDYSIILW DVNNGQPFKT LQGHTSIVMS VTFSPDGRFL ASGSFDQTIR IWDFLTGECL LILQGHTRGI ESVGFSRDGC FLVSGGEDET IKLWQVQTGE CLKTFKPKRP YEGMNLTGVT GLTESQITSL LALGALSD
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